Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1501 ATGGCGATAACAGTACCAAGTAGACAATTATTCATTGATGGAGAGTGGAAAGCTCCTATCCTCAACAAAAGAATTCCAATCATCAATCCCTCCACTGAAAACATCATAGGGGATATACCTGCTGCTACTAAGGAAGATGTTGACTTTGCTGTGGAGGCTGCTAAAAGAGCCTTGTCTCAGAACAAAGGTAGAGATTGGTCTACTGCTTCTGGCTCCGTTCGTGCTGGCTATCTTCGAGCCATCGCTGCAAAGATAACTGAGAAAAAAAATGAACTAGGCAAACTGGAATCAATTGATAGTGGAAAACCACTGGAGGAAGCACTCGCGGATCTGGATGATGTTATTGCTTGTTTTGAGTACTATGCCGGGCTTGCTGAAGGGTTAGATGCAAAGCAAAAGACTCCTGTATCTCTTCCTATGGATACCTTCAAGAGTCATGTTCTCAAGGAGCCTATTGGTGTTGTTGCGTTAATTACTCCATGGAACTATCCTCTCTTAATGGCAACATGGAAAGTTGCTCCAGCTCTGGCTGCTGGTTGTGCTGCAATATTGAAGCCGTCTGAATTAGCATCTGTGACCTGTTTGGAGTTAGGCGAAATATGTAGAGAAGTTGGCCTTCCTCCTGGTGTCTTAAATATTCTCTCTGGATTAGGCCATGAAGCTGGTGCTTCTTTAGCATCTCATCCTGACGTAGATAAGATTGCCTTTACTGGTAGCTCTGCAACTGGGAGCAGGATTATGACAGCTGCGGCGCAGCTAATCAAGCCTGTTTCACTCGAGCTTGGTGGAAAGAGCCCAATCCTTGTTTTTGAGGATGTTGACCTTGACAAGGTTGCTGAATGGACCATCTTTGGCTGCTTCTTTACAAATGGTCAGATGTGCAGTGCAACATCTCGCCTTATTGTGCATGAAAGTATAGCAAAAAAATTTGTGAATAAACTTGTGAAATGGGCCGAAAACATCAAAATTTCTGATCCGTTGGAAGAAGGTTGCAGGCTAGGCCCTATTGTCAGTGAAGCACAGTATAAGAAAGTATTGAATTTTATCGCAACGGCTAAGAGCGAGGGTGCAACAATTTTGACTGGTGGGCGTCGGCCAGAGCATTTACAGAAGGGATACTTTGTTGAACCAACCATTGTATCCGATGTGACTACCTCAATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTACTCTCTGTTAAAACATTTAGCACTGAAGAAGAAGCTATTGATCTAGCAAATGACACACACTATGGCTTGGGGTCAGCTGTAATGTCAAATGATTTAGAAAGATGTGAACGCGTATCTCAGGCTCTACAAGCTGGAATTGTATGGATCAATTGTGCTCAACCAAGCTTTATTCAAGCTCCATGGGGAGGCATTAAACGTAGCGGTTTTGGTCGCGAATTAGGAGAATGGGGACTTGATAACTACTTGAGTGTGAAGCAAGTTACGACGTACATATCTGGTGATCAGTGGGGCTGGTATCAATCCCCTTCAAAGCTGTGA 1512 0.4372 MAITVPSRQLFIDGEWKAPILNKRIPIINPSTENIIGDIPAATKEDVDFAVEAAKRALSQNKGRDWSTASGSVRAGYLRAIAAKITEKKNELGKLESIDSGKPLEEALADLDDVIACFEYYAGLAEGLDAKQKTPVSLPMDTFKSHVLKEPIGVVALITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELGEICREVGLPPGVLNILSGLGHEAGASLASHPDVDKIAFTGSSATGSRIMTAAAQLIKPVSLELGGKSPILVFEDVDLDKVAEWTIFGCFFTNGQMCSATSRLIVHESIAKKFVNKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNFIATAKSEGATILTGGRRPEHLQKGYFVEPTIVSDVTTSMQIWREEVFGPVLSVKTFSTEEEAIDLANDTHYGLGSAVMSNDLERCERVSQALQAGIVWINCAQPSFIQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTTYISGDQWGWYQSPSKL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1501 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 4 503 IPR016162 GO:0016491
Tpr6g1501 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Tpr6g1501 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Tpr6g1501 503 SUPERFAMILY ALDH-like 5 486 IPR016161 GO:0016491
Tpr6g1501 503 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 1 503 - -
Tpr6g1501 503 Pfam Aldehyde dehydrogenase family 23 485 IPR015590 GO:0016491
Tpr6g1501 503 CDD ALDH_F10_BADH 27 487 - -
Tpr6g1501 503 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 503 - -
Tpr6g1501 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 264 454 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1501 Tpr-Chr6 16267236 16271240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1501 1 501 Aldehyde Dehydrogenase Gene Family AT1G74920 76.048 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1501 K00130 - gmx:100170755 888.256