Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1488 ATGCAAAGGTATGATATAATTTTAGGCACGACAAGAGGTTTGGCCTATCTGCACGAGGATTTCCATGTTTGTATTATACATAGGGATATAAAGACTGGCAACATTCTCTTAGACGATGATCTTCAGCCTAAAATTGCTGATTTTGGGTTGGCAAGGCTTTTACCAGAAGATCAATCTCATCTTAGCACAAGATTTGCAGGAACATTGGGATACACTGCACCAGAATATGCAATACATGGTAAGTTAAATATTGTTGGAGATAATATGCAAGGTGCTGTGTTTGGAGAGCTGCTAGATTGCCTCTTGAAACCTACAAACATCAAAGAGAAAATATCAAGCTTGATGCTACTTGCATCTCTTGGAAGCGAATGCGAGGAAACTATGTTAAAACAATTGATGTTGTTGGAGTTTGGCAAGAGAACAATGTTGTTGAAACTGAAAAGACCATTGAAGCTCTTAAAAGAGTTGGATAGTAAATTTAGAAAAGTTCTCAGAATTGATGTTATTCTTGTTGTATAA 519 0.3661 MQRYDIILGTTRGLAYLHEDFHVCIIHRDIKTGNILLDDDLQPKIADFGLARLLPEDQSHLSTRFAGTLGYTAPEYAIHGKLNIVGDNMQGAVFGELLDCLLKPTNIKEKISSLMLLASLGSECEETMLKQLMLLEFGKRTMLLKLKRPLKLLKELDSKFRKVLRIDVILVV* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1488 172 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 2 89 - -
Tpr6g1488 172 SUPERFAMILY Protein kinase-like (PK-like) 2 83 IPR011009 -
Tpr6g1488 172 Gene3D Transferase(Phosphotransferase) domain 1 1 149 - -
Tpr6g1488 172 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672|GO:0006468
Tpr6g1488 172 Pfam Protein kinase domain 5 76 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1488 172 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1488 172 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1488 Tpr-Chr6 16058938 16062351 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1488 2 112 Receptor kinase-like Gene Family AT1G70520 54.955 2.85e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr6g1488 Pkinase 1.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1488 - - vun:114187094 161.77