Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1485 ATGGTGATGATATGGGAAGATCTAACAGTAACAATTGGTGCAGACAACAAGAAGTTGCTTGATGCTGTCACTGGTTTTGCTCAACCTGGTAGGATCATGGCTGTTATGGGTCCTTCTGGTTGTGGCAAAACTACCTTACTCACCTCATTGGCTGGAACACATGCTGCAAATGTTACAGAGGCTGGCAACATTCAAATCAACGGGAAAAGGAGAAATTTGTACTCCAAACAAGTGTCTTTTGTGGGTCAAGAGGAACTTTTCTTGGGAACTTTAACTGTAAAAGAAACCCTCACATACTCAGCAAATATGAGGCTACCTTCTAAAATGACAAAACAAGAGATAGACAAAGTTGTGGAAGACACAATAATTGAAATGGGACTTGAAGATTGTGCTAATACTAAAATTGGTAATTGGCATCTAAGAGGTATTAGTAATGGTGAAAAGAAAAGACTTAGCATTGGTCTTGAGATTTTGACACAACCCTTTGTGTTACTTCTTGATGAACCAACTAGTGGACTTGATAGTGCCTCAGCATTCTATGTCATTCAAGCTCTAAGTAACATTGCTTTTAAAGGAAAGATTGTTATTTGTTCAATTCATCAGCCTGGGTGTGAAACTTTTAATATTTTTGATGATTTACTTTTGCTCTCAAATGGTGAAACTGTTTATTTTGGAGAAGCTAAGATGGCTCTAAAGTTTTTTGCTGATGCAGGTTTTCCTTGTCCTATCAAAAGAAATCCTTCAGATCATTTCCTTATGAGCATTAATTTGGATTTTGACTTCATTAATGAAGCTCTTGCAAGATGCCATGTAAGCATAGAAATTTTATGTAATTCCAATATTGTAAGAAGCAGTGCCAATTGGTGGAAGCAACTTAGCACATTAACCAAACGGTCTTTCCTTAACATGAACAGAGACTTGGGTTACTATTGGCTAAGGATAATATTCTACATACTTACAGGAATTACTATTGGCACCCTCTTTTTTCACATTGGCACTGGCAACTCCTCAATTTTGGCTAGAGGAAAGTGTGTATCATTCATTTATGGTTTCATGATAAGTATGTCATGTGGAGGATTGCCATTTTTCATTGTAGAATTGAAGGTGTTCTATGGTGAAAGATCCAAAGGGCATTGTGGAGAGGCTGCATTTGTAATATCAAACCTTATATCATCATTCCCTTTCCTCCTTCTAGTATCAATCTCCTCTGGAGTTGTTATTTATTTCATGGTTCAATTTCATCCTGGTTTTGAAAATTGTACATTTTTTTGTATCAACTTATTTTGCTGTCTATCGGTTGTTGAGAGCTGTATCATGGTTGTGGCCGCAATTATCCCAAATGTCATGACGGGTATAGGAACAGGGACCGGTTTTATAATTTTCATGATGATGCCTTCCCAAATATTCAGACCACTAAATGACCTTCCTAAGTTCTTTTGGCGCTATCCAATGTCCTATCTCAGTTTTGCTTCTTGGGCAGTGCAGGGACAATACAAGAATGACATGTTAGGGGTTGAGTTTGATCCTCTACTACCTGGAGGCCCAAAAGTTACTGGAGAACAAGTATTGCCAATATTATTTGGTGTTTCACTAAGTCATGGAAAATGGTTGGACCTAACAGTTTTGGTTATCTTATTATTTCTTCATAGATTGCTTCTTTTCTTGGTGCTTCGTTATAACAAAAGAGGAATATCACATTTGCTATGGATTTATGCAATGGGAAATCTACAATTTGCAAAACGAGGTTTACTGAAGAAAAAGCCATCAATGTCTTCTAAGAAACAAGAACCAACCCGTCCACTATCGTCTCTAGAGAATGCTATGTCACCAGACTATGCAATATTAAAGCTTTGA 1854 0.3727 MVMIWEDLTVTIGADNKKLLDAVTGFAQPGRIMAVMGPSGCGKTTLLTSLAGTHAANVTEAGNIQINGKRRNLYSKQVSFVGQEELFLGTLTVKETLTYSANMRLPSKMTKQEIDKVVEDTIIEMGLEDCANTKIGNWHLRGISNGEKKRLSIGLEILTQPFVLLLDEPTSGLDSASAFYVIQALSNIAFKGKIVICSIHQPGCETFNIFDDLLLLSNGETVYFGEAKMALKFFADAGFPCPIKRNPSDHFLMSINLDFDFINEALARCHVSIEILCNSNIVRSSANWWKQLSTLTKRSFLNMNRDLGYYWLRIIFYILTGITIGTLFFHIGTGNSSILARGKCVSFIYGFMISMSCGGLPFFIVELKVFYGERSKGHCGEAAFVISNLISSFPFLLLVSISSGVVIYFMVQFHPGFENCTFFCINLFCCLSVVESCIMVVAAIIPNVMTGIGTGTGFIIFMMMPSQIFRPLNDLPKFFWRYPMSYLSFASWAVQGQYKNDMLGVEFDPLLPGGPKVTGEQVLPILFGVSLSHGKWLDLTVLVILLFLHRLLLFLVLRYNKRGISHLLWIYAMGNLQFAKRGLLKKKPSMSSKKQEPTRPLSSLENAMSPDYAILKL* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1485 617 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 243 IPR003439 GO:0005524
Tpr6g1485 617 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 1 279 - -
Tpr6g1485 617 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 282 581 - -
Tpr6g1485 617 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 282 581 - -
Tpr6g1485 617 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 279 - -
Tpr6g1485 617 Pfam ABC-2 type transporter 200 252 IPR043926 GO:0140359
Tpr6g1485 617 SMART AAA_5 29 220 IPR003593 -
Tpr6g1485 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 232 IPR027417 -
Tpr6g1485 617 Gene3D - 2 234 IPR027417 -
Tpr6g1485 617 Pfam ABC-2 type transporter 291 496 IPR013525 GO:0016020|GO:0140359
Tpr6g1485 617 Pfam ABC transporter 22 171 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1485 Tpr-Chr6 16013385 16020766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1485 30 300 Calmodulin-binding Proteins AT2G36910 24.910 7.88e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1485 - K05681 gmx:100802207 884.789