Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1484 ATGGTGATGATATGGGAAGATCTAACAGTAACAATTGGTGCAGACAACAAGAAGTTGCTTGATGCTGTCACTGGTTTTGCTCAACCTGGTAGGATCATGGCTGTTATGGGTCCTTCTGGTTGTGGCAAAACTACCCTACTCACCTCATTGGCTGGAACACATGCTGCAAATGTTGCAGTGACCGGCAACATTCAAATCAATGGGAAAAAGAGAAATTTGTACTCCAAAGAAGTGTCTTATGTGGGTCAAGAGGAACTTTTCTTAGGAACTTTGACTGTAAAAGAAACCCTCACATATTCTGCAAACATGAGGCTACCTTCTAAAATGACAAAACAAGAGATAGACAAAGTTGTGGAAGACACAATAATTGAAATGGGACTTGAAGATTGTGCTAATACTAAAATTGGTAATTGGCATCTAAGAGGTATTAGTAATGGTGAAAAGAAAAGACTTAGCATTGGTCTTGAGATTTTGACACAACCCTTTGTGTTACTTCTTGATGAACCAACTAGTGGACTTGATAGTGCCTCAGCATTCTATGTCATTCAAGCTCTAAGTAACATTGCTTTTAAAGGAAAGATTGTTATTTGTTCAATTCATCAGCCTGGGAGTGAAACCTTTAATATTTTTGATGATTTACTTTTGCTCTCAAATGGTGAAACTGTTTATTTTGGAGAAGCTAAGATGGCTCTAAAGTTTTTTGCTGATGCAGGTTTTCCATGTCCTACCAAAAGAAATCCTTCAGATCATTTTATTATGAGCATTAATTTGGATTTTGACTTGATTAATGAAGCTCTTGCAAGATGCCATCCTACGTCATCCAATTCTACGACGGGAATGAGAACGACAGACATTAGAAAGGAACTCATAAAGAATTACAACATTTCAGAGCTATTTATCAATACAAGACTAAAAGTTCAACAACTAAAAAACAATGTGATGGAAGGGGAAGCAACTAATTCCAATATTGTAAGAAGCTGGTGGAGGCAACTTAGCACATTGACCAAAAGATCTTTCCTTAACATGAACAGAGACTTGGGTTACTATTGGCTAAGGATAATATTCTACATACTTACAGGAATTACTATTGGCACCCTCTTTTTTCACATTGGCACAGGCAACAACTCAATTTTGGCTAGAGGAAAGTGTGTATCATTCATTTATGGTTTCATGATATGTTTGTCATGTGGAGGATTGCCATTATATGTATTTTATGGTGAAAGATCCAAAGGACATTGTGGAGAGGCTGCATTTGTGATATCAAACATTATATCATCATTCCCTTTCCTCCTTCTAATATCACTATCCTCTGGAATAATAATTTACTTCATGGTGCAATTTCATCCTGGTTTTATAAATTGTACATTTTTTTGTATCAACTTATTCTGTTGTCTATCGGTTGTTGAGAGCTGCATCATGGTTGTGGCCGCAATTGTCCCGAATGTCATGATGGGTATAGGAACAGGGACCGGTTTTATAGTTTTTATGATGATGCCCTCCCAAATATTCAGACCACTAAATGACCTTCCTAAGTTTTTTTGGCGCTATCCAATGTCCTATCTCAGTTTTGCTGCTTGGGCAGTGCAGGGACAATACAAGAATGACATGTTGGGGGTTGAGTTTGATCCTCTACTACCTGGGGACCCAAAAGTTACTGGAGAACAAGTACTACCAATATTATTTGGTGTTCCACTAAATCATGGAAAATGGTTGGACCTAACAATTTTGGTTATCTTACTATTTCTCCATAGATTGCTTCTTTTCTTGGTGCTTCGATATAACAAAAGAGGAATATCACATTTCCTATGGTTTTATGCTAAGAAAAATCTACAATTTGCAAAACAGCATTTAACGAAGAACAAGCCATCAATGTCTTCTAAGAAACAAGAACTGCCACGTCCATTATCTTCTCTAGAGAATGCTATGTCTCCACCACAATATTAA 1944 0.3709 MVMIWEDLTVTIGADNKKLLDAVTGFAQPGRIMAVMGPSGCGKTTLLTSLAGTHAANVAVTGNIQINGKKRNLYSKEVSYVGQEELFLGTLTVKETLTYSANMRLPSKMTKQEIDKVVEDTIIEMGLEDCANTKIGNWHLRGISNGEKKRLSIGLEILTQPFVLLLDEPTSGLDSASAFYVIQALSNIAFKGKIVICSIHQPGSETFNIFDDLLLLSNGETVYFGEAKMALKFFADAGFPCPTKRNPSDHFIMSINLDFDLINEALARCHPTSSNSTTGMRTTDIRKELIKNYNISELFINTRLKVQQLKNNVMEGEATNSNIVRSWWRQLSTLTKRSFLNMNRDLGYYWLRIIFYILTGITIGTLFFHIGTGNNSILARGKCVSFIYGFMICLSCGGLPLYVFYGERSKGHCGEAAFVISNIISSFPFLLLISLSSGIIIYFMVQFHPGFINCTFFCINLFCCLSVVESCIMVVAAIVPNVMMGIGTGTGFIVFMMMPSQIFRPLNDLPKFFWRYPMSYLSFAAWAVQGQYKNDMLGVEFDPLLPGDPKVTGEQVLPILFGVPLNHGKWLDLTILVILLFLHRLLLFLVLRYNKRGISHFLWFYAKKNLQFAKQHLTKNKPSMSSKKQELPRPLSSLENAMSPPQY* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1484 647 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 616 - -
Tpr6g1484 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 233 IPR027417 -
Tpr6g1484 647 Gene3D - 2 234 IPR027417 -
Tpr6g1484 647 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 1 616 - -
Tpr6g1484 647 MobiDBLite consensus disorder prediction 619 647 - -
Tpr6g1484 647 Pfam ABC-2 type transporter 329 530 IPR013525 GO:0016020|GO:0140359
Tpr6g1484 647 Pfam ABC-2 type transporter 200 252 IPR043926 GO:0140359
Tpr6g1484 647 SMART AAA_5 29 220 IPR003593 -
Tpr6g1484 647 Pfam ABC transporter 22 171 IPR003439 GO:0005524
Tpr6g1484 647 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 243 IPR003439 GO:0005524
Tpr6g1484 647 MobiDBLite consensus disorder prediction 619 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1484 Tpr-Chr6 15998040 16005602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1484 27 201 Calmodulin-binding Proteins AT2G36910 29.121 8.85e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1484 - K05681 gmx:100802207 933.324