Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1482 ATGATCATCATGGAGAATTGTTCAAGAAGTGGTGTTCATGATTTCACTATGGCTTCAAGAAAAGCTGAAGAAGCAACTTGGAGACGTTATGAGGCAACACAATGGCTTGAAAATCAAGTGGGTCCTCTTGGAATATCAAATCAACCAACTGAGAGAGATCTTGTTTCTTGCTTGAGAAATGGTTTGATTCTTTGTAAGGCTATTAACAAGATTCATCCAGGTGCAGTGCCAAAGGTTGTGGATAATCAAGTGCCATTGCAATCACTTACATGGGATTCCCAGCCTTTGCCAGCTTATCAGTATTTTGAAAATGTCAGAAACTTTCTGGATGCTGCTGCAGAATTAAAGGTTCCAGCTTTCGAAGCTTCTGATCTCGAAAGGGAAAGTGTAGAGAATGGATCAGCAGGAAAAATTGTTGATTGCATTCTATCACTTAAAGGGTTTCATGAGTCAAAGCAGATGGGCAATCAGAGTGGAAGCAAACACGTGAAATCTCCTTTAGTTTTGCAATCAATCAGTAGATTGCAACAAAGAGCCACAACTGCATTACCCTCTGATGCATGCAGGCGCTTGGATTTGTCTGCAACATCGGAAAAAAAGCCTCCTGCTGAGAATAATTCTCAAAAACGGGAAGAAATTACAGAATCACTTGTCAAGATACTAGTTGACCGTATGCTTGATGCCAAAGAAAATATCGACGGAAAACTTGTTGCTTCTCTTTGTAATGGAGACATGGATCCATTAATCCTATTTAATCAGATTTTGACTAGTTATTGTGGGGAACAGCCATCTATGAAGGTCCCTGAGTTGCCATTGCTACTAAAGAATTTTACAAAAGAAGGGAGTAGCTTACCACCTGATTTCACTTCCAAACCGACAGAATCAAATGCTCTCTCTGCAAGTCAAATTTCCAAGTGTTACAGAGCTTGCCCCGGAAAGTGCACATGCAATCACAAGCATCTCATAGACATACAGGAAAAAGAACTTCAGGATCTCAAGGCTTTGAAATTGAAAGTTAAGAATGAGTTTGAAGAGATGCAATCACAGGTTCAGAAATTTTTCAATGATATAGGAAGTCAAGTAAATGAGATGTCAACCAAAGCTCTTGGTTATCACAAAGTAGTAGAAGAGAACAGAAAACTATACAACATGGTCCAAGATTTGAAAGGTAATATTCGAGTTTACTGCAGAATCAGACCTGCATTCAGTTCCGAATCCAAGAATGTTGTTGATTTCATTGGGGAAGACGGTTCTCTATTCATTATAGATCCATCTAAAACACTAAAAGATGGAAGAAAACTTTTTCAATTTAATCGGATTTTCGGTCCAACAGCTGGCCAAGACGAGGTTTATCGAGACACTCAACCTTTAATTAGGTCTGTGATGGATGGATACAACGTTTGTATTTTTGCTTATGGTCAAACGGGATCTGGGAAGACTCACACCATGAGCGGTCCTTCCGACGGAACATCCAAGGATATGGGGATCAATTATCTGGCTCTCAATGATTTGTTTCAAATGTCTAATGAAAGGAGGGACAATATAAAGTATGACATTTATGTCCAAATGGTTGAGATTTACAATGAACAAGTAAGAGACCTACTTGCAGAGGACAAAACAGAAAACAAATTAGAGATCCGGAGCTGCAACGATGATGGGTTGAGCCTTCCTGATGCTAGATTGCGGTCAGTAAACTCTACCACTGATGTTCTGACCCTCATGAAACTTGGCGAGGTTAACCGCGCCGTCAGTTCTACAGCAATAAACAATAGGAGTAGTCGTTCACACAGTGTACTTACGGTGCATATCAATGGCAAAGATACATCTGGCAACTCCATTCGAAGTTGTCTTCATTTAGTAGACCTTGCTGGAAGCGAAAGAGTTGACAAGTCTGAAGTCACAGGAGATAGACTTAAGGAAGCGCTATATATTAACAAGTCTCTTTCTTGTTTGGGAGATGTGATCACAGCACTGGCACAGAAGAATTCTCACATTCCTTACAGGAATAGCAAACTCACACTACTTTTGCAGGACTCGTTAGGTGGACATGCTAAAACTTTGATGTTTGCACATGTGAGTCCCGAAGCAGATTCCTTTAGTGAAACAGTGAGTACTCTAAAATTTGCTCAGAGGGTTTCCACTGTGGAACTTGGTGCAGCCCGGATGAACAAAGAAAGCAGTGAAGTTATGCAACTTAAAGCACAGGTTGAGAACCTTAAGATTGCATTGGCAAACAAAGAAAATTCAAGACCAATGTTTAATAAAACTAAAGAGCCTCTCACTCCAGTAGAAAAAACTCCACTGCGCCTGCGAAGACTTAGTATTGAGAATTGCAGCACGGTAAAGACTGACAAACCTGTGAAAGCTGAGGATAAAACTGGAGCCAAATCACCTTCTTACATTCCCCGTTCAAGACGGCTAAGCTTGGAAGGTCCAAGAACTATTAAAAAAGCATCATCTGATGTAAACAAAACTTTACAGTTTGAGCCAATGTCTCAACAGAAATATCGTCTACAGCAAGATCCAGAAGCAGTGTCAAAGCTAAATGGCCAATTGAGCAATGGCAATTCCAGATCAGATGTGCATGTTAAAGCTCCTTCAAGTCCTACAAACATGTATCAGAAGAGGTTGATAAAAGTTGATAGTGGAGTCCAAATACACCCTCTTCAACTACCTAAAACACCTGAACAACAATTGCTAGATAAAAATGATTCAAACCGAATTGTGCCAACTGACCTTGCTGATTCCATAACAACAAAGGCGATTGGTAGCACAAATGGAAAAGGATCCCAGCTAAGAAGATCCCTTAGAACAATTGGGAAACTGATTAATGGCCCTGATAAGAAGAGCCAACAAATTATGGTTGAAGTGAAGTCACCTATCAAGAGCAGCAATCATGCAAATCAGATAAAGTCGCCAATAGCAGCAAGTGAGAGGAAAAAAAGGAGGCAATCTTTAACAGGAATTCAACCATCCGGGCCTAACAATTCGCGAAGATCTTCTCTTGGAGGAGTGAAACCGGTCCCAGTAGCATATGAGAAGGAGAGAAATGCTAGAACACCTCCTCCTGTTCATTCAGAAAGCAAAACTTCAAAACGGTGGCTATAG 3108 0.4048 MIIMENCSRSGVHDFTMASRKAEEATWRRYEATQWLENQVGPLGISNQPTERDLVSCLRNGLILCKAINKIHPGAVPKVVDNQVPLQSLTWDSQPLPAYQYFENVRNFLDAAAELKVPAFEASDLERESVENGSAGKIVDCILSLKGFHESKQMGNQSGSKHVKSPLVLQSISRLQQRATTALPSDACRRLDLSATSEKKPPAENNSQKREEITESLVKILVDRMLDAKENIDGKLVASLCNGDMDPLILFNQILTSYCGEQPSMKVPELPLLLKNFTKEGSSLPPDFTSKPTESNALSASQISKCYRACPGKCTCNHKHLIDIQEKELQDLKALKLKVKNEFEEMQSQVQKFFNDIGSQVNEMSTKALGYHKVVEENRKLYNMVQDLKGNIRVYCRIRPAFSSESKNVVDFIGEDGSLFIIDPSKTLKDGRKLFQFNRIFGPTAGQDEVYRDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSDGTSKDMGINYLALNDLFQMSNERRDNIKYDIYVQMVEIYNEQVRDLLAEDKTENKLEIRSCNDDGLSLPDARLRSVNSTTDVLTLMKLGEVNRAVSSTAINNRSSRSHSVLTVHINGKDTSGNSIRSCLHLVDLAGSERVDKSEVTGDRLKEALYINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFSETVSTLKFAQRVSTVELGAARMNKESSEVMQLKAQVENLKIALANKENSRPMFNKTKEPLTPVEKTPLRLRRLSIENCSTVKTDKPVKAEDKTGAKSPSYIPRSRRLSLEGPRTIKKASSDVNKTLQFEPMSQQKYRLQQDPEAVSKLNGQLSNGNSRSDVHVKAPSSPTNMYQKRLIKVDSGVQIHPLQLPKTPEQQLLDKNDSNRIVPTDLADSITTKAIGSTNGKGSQLRRSLRTIGKLINGPDKKSQQIMVEVKSPIKSSNHANQIKSPIAASERKKRRQSLTGIQPSGPNNSRRSSLGGVKPVPVAYEKERNARTPPPVHSESKTSKRWL* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1482 1035 SUPERFAMILY Calponin-homology domain, CH-domain 26 158 IPR036872 -
Tpr6g1482 1035 Coils Coil 322 349 - -
Tpr6g1482 1035 Gene3D - 13 178 IPR036872 -
Tpr6g1482 1035 Gene3D Kinesin motor domain 333 717 IPR036961 -
Tpr6g1482 1035 MobiDBLite consensus disorder prediction 986 1002 - -
Tpr6g1482 1035 ProSiteProfiles Kinesin motor domain profile. 391 715 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g1482 1035 Coils Coil 722 749 - -
Tpr6g1482 1035 MobiDBLite consensus disorder prediction 192 211 - -
Tpr6g1482 1035 Pfam Kinesin motor domain 397 714 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g1482 1035 ProSiteProfiles Calponin homology (CH) domain profile. 26 150 IPR001715 GO:0005515
Tpr6g1482 1035 Pfam Calponin homology (CH) domain 28 148 IPR001715 GO:0005515
Tpr6g1482 1035 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 1023 - -
Tpr6g1482 1035 PANTHER KINESIN-LIKE PROTEIN KIN-14L 6 1023 - -
Tpr6g1482 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 714 IPR027417 -
Tpr6g1482 1035 CDD CH 28 145 IPR001715 GO:0005515
Tpr6g1482 1035 PRINTS Kinesin heavy chain signature 464 485 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g1482 1035 PRINTS Kinesin heavy chain signature 586 603 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g1482 1035 PRINTS Kinesin heavy chain signature 616 634 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g1482 1035 PRINTS Kinesin heavy chain signature 665 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g1482 1035 SMART ch_5 28 148 IPR001715 GO:0005515
Tpr6g1482 1035 SMART kinesin_4 389 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g1482 1035 MobiDBLite consensus disorder prediction 960 1035 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1482 Tpr-Chr6 15973599 15981256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1482 327 715 Calmodulin-binding Proteins AT5G65930 40.201 3.15e-69 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1482 K10406 - gmx:100786642 1478.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1482 6 15973599 15981256 Tpr6g1482 6 15973599 15981256 ECH