Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1475 ATGGCAGAATCATTTGTGTTTGATATTGCTGATTCACTGCTAGGGAAGCTTGCTTCTTATGCCTATGATGAAGTTTCTCGAGCTTATGGTGTGTTTGATGATCTAAAAGAGATCAAAAACACTTTGTCAATTGTCAGAGGTCTTATTTTAGATGCTGAGTATAAGAAGGACAAAAAGCACGGGCTGCGAGAATGGATGAGACAGATTCAAAACATCTGCTCTGATGCTGAAGACGTATTTGATGGATTTGAGTTCCAACACAAGAGGAAGGAAGTTGTCGCAACTTCTAACAGCACTCAGATGAAGGTACGACACTTCTTTTCTTCCTCTAATCCAATTGTTTTCCGTCCTAGGATGGCACTTCAAATCAAAGACATTAGGGACAGATTGAATAAGGTAGCAGCTGATGGGAACAATTTTGGTCTTGGGAAAATCGATGTTGGTCCTGAACTTGTTTTGCAAAGGAGAGAATTGACTCACTCCCATGTTGATCCTTTAAGTGTAATTGGGAGGGAGAATGATAAGGAAGAAATTATCAAGGTTTTGATGCAACCACATCCTCATGGTGATGGTGATGGTGACAAAAGTTTGTGTGTTATTCCCATTGTGGGAATTGGAGGCTTGGGAAAGACCACTCTTGCAAAGTTGGTTTACAATGATAAAAGGATGGATGATCTTTTTCAGTTGAAGATGTGGACTTGTGTCTCTGATGATTTTGACATCAGTCAAATAATTATTAAAATCATCAACTCCGTTTCTGCTTCAACGTTCACTCCAGTTTCAGCTCCACCGAGTCTTGCTCCTGGTCACCAAAAAAACATCAATAATTTCGATATTGAGCAGCTACAAAGTTGTTTAAGACCAAAACTTGTTGGTCAGAAGTTTTTGCTTGTGCTAGATGATATATGGAATGATGATCGTGCAAAATGGATTGAGTTGATAGATTTGATAAAAGTCGGTGCAACAGGAAGCAAAATCATAGTGACGACACGTAGCAACTCAGTTGCTTCAATGATGGGTACAATTCCCTCGTACGTTTTGGAAGGTCTTTCTCTAGGGGATTGTTTATCGTTGTTTGTCAAATGGGCATTTAAGGAAGGTGAAGTAATTAAATATCCAGATCAAGTGGAGATTGGAAAAGAAATCGTGAAAAAATGTGCAGGAGTTCCGCTTGCTGTGAGAACATTAGGAAGTTCCTTATTCTCAAAATATGATTTAAAAAAGTGGCGATTTGTGAGAGATTCTGAGATATGGAACTTAGAACAGAAGAAAGATGATATTTTGCCTGCATTAAAGTTAAGCTATGATCAAATGTCATCTTGTTTGAGGCAATGCTTTGCTTACTTTTCCCTTTATCCCAAAGATTATACGTTTTCTTGTGATGATATTACTAGGCTTTGGATAGCTCTTGGATTAGTACAGTCTCAGAATGGGAATGAGAAACTGAAGGATATTGCAAGAGAATATCTAGACGAGTTAAATTCTAGATCATTTCTTCAATATTACGATAACATTAATATTCCTGACTATTTCAAATGTGTAACAGTGGACTCACATACTAGGAATGTACCTGAACACGCAAGACACTTATCAATTGTTGAAAAAATTTCAGCAGACAATGCTTTGTTCCCCAAGTCCAGAAGTTTGAGAACTATATTATTTCCCATCGAAGGAGTGGGTCTTGACATGGGAACTTTGTTGGATACTTGGATATCAAGATACAAATACTTACGATATTTAGATTTAAGATATTCTTCCTTCAACACCCTGCCTAAGTCAATTGCTAAATTGGAGCACTTGCGAGTTCTCGACCTTACTCATAATTTGAATATCAGAAGACTTCCCCATTCTATTTGCAAACTCCATAATTTGCAAGTCTTGAAACTCACTGGATGCACGGAGCTTGAAACATTGCCTCAAGGGTTGGGGTTGTTGATTAGCCTTCGGGAACTTTACATAACCACAAAGCAATCAGTTATGTCATTGACAGAATTTGCAAACTTGAACCACCTTCAAGATTTGACTTTTCATAATTGTGACAATATGAAGTTTCTATTCAGCGAGGCACAACAACTATCTTCCCTTGAAATATTGTCTGTTAGTTCATGTGGTAGCCTAGAGTCCTTACCTCTCTTTATTTTTCCTAAACTACAGACTCTGATTATTTCAGACTGTCAGATGATAAACTTGTCGTTGTACAACGAAAGTCCAATCCAAAGTTTGACGATGAAGCAATTATATATTGGAAATCTTACGGGGCTTCTGACATTTTCTGGTTGGATTGAAGGTGTTGTAGATACTTTAGAGACCTTACAAATTTATGAACTTCCCAATCTTAAGACACTTCCCGAGTGTCTAACAAGAATGACTCGTCTTAAGAGGCTTCAGATGTTTGACTGCCCTCAACTGTTGAGTCTTCCAAGTGATCTTCATCGCCTCACTGCCCTTGAAAATTTAGTCATATATGATTGTTCTAAATTGTTCCAAAAATATCAGCCTCAGCTTGGTGAGTACTGGCACAAGATTGCTCACATAAAAAATATTGAGGTGGACGAATGA 2559 0.3791 MAESFVFDIADSLLGKLASYAYDEVSRAYGVFDDLKEIKNTLSIVRGLILDAEYKKDKKHGLREWMRQIQNICSDAEDVFDGFEFQHKRKEVVATSNSTQMKVRHFFSSSNPIVFRPRMALQIKDIRDRLNKVAADGNNFGLGKIDVGPELVLQRRELTHSHVDPLSVIGRENDKEEIIKVLMQPHPHGDGDGDKSLCVIPIVGIGGLGKTTLAKLVYNDKRMDDLFQLKMWTCVSDDFDISQIIIKIINSVSASTFTPVSAPPSLAPGHQKNINNFDIEQLQSCLRPKLVGQKFLLVLDDIWNDDRAKWIELIDLIKVGATGSKIIVTTRSNSVASMMGTIPSYVLEGLSLGDCLSLFVKWAFKEGEVIKYPDQVEIGKEIVKKCAGVPLAVRTLGSSLFSKYDLKKWRFVRDSEIWNLEQKKDDILPALKLSYDQMSSCLRQCFAYFSLYPKDYTFSCDDITRLWIALGLVQSQNGNEKLKDIAREYLDELNSRSFLQYYDNINIPDYFKCVTVDSHTRNVPEHARHLSIVEKISADNALFPKSRSLRTILFPIEGVGLDMGTLLDTWISRYKYLRYLDLRYSSFNTLPKSIAKLEHLRVLDLTHNLNIRRLPHSICKLHNLQVLKLTGCTELETLPQGLGLLISLRELYITTKQSVMSLTEFANLNHLQDLTFHNCDNMKFLFSEAQQLSSLEILSVSSCGSLESLPLFIFPKLQTLIISDCQMINLSLYNESPIQSLTMKQLYIGNLTGLLTFSGWIEGVVDTLETLQIYELPNLKTLPECLTRMTRLKRLQMFDCPQLLSLPSDLHRLTALENLVIYDCSKLFQKYQPQLGEYWHKIAHIKNIEVDE* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1475 852 CDD RX-CC_like 2 134 IPR038005 -
Tpr6g1475 852 Gene3D - 152 343 IPR027417 -
Tpr6g1475 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 448 IPR027417 -
Tpr6g1475 852 Gene3D Ribonuclease Inhibitor 523 850 IPR032675 -
Tpr6g1475 852 PANTHER DISEASE RESISTANCE PROTEIN RP 6 739 IPR044974 GO:0006952
Tpr6g1475 852 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 739 - -
Tpr6g1475 852 SUPERFAMILY L domain-like 504 827 - -
Tpr6g1475 852 Pfam Leucine rich repeat 576 632 IPR001611 GO:0005515
Tpr6g1475 852 Pfam NB-ARC domain 173 436 IPR002182 GO:0043531
Tpr6g1475 852 PRINTS Disease resistance protein signature 199 214 - -
Tpr6g1475 852 PRINTS Disease resistance protein signature 289 303 - -
Tpr6g1475 852 PRINTS Disease resistance protein signature 386 400 - -
Tpr6g1475 852 PRINTS Disease resistance protein signature 690 706 - -
Tpr6g1475 852 Pfam Rx N-terminal domain 12 102 IPR041118 -
Tpr6g1475 852 Gene3D - 350 439 IPR042197 -
Tpr6g1475 852 Gene3D - 10 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1475 Tpr-Chr6 15920339 15922945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1475 200 827 WRKY Transcription Factor Family AT5G45050 23.112 1.14e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1475 - - mtr:MTR_7g091550 1116.68