Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1473 ATGGCAGAATCATTTCTTTTTGATATTGCCAGTTCACTCCTAGGGAAGCTTGCTTCTTATGCGTATGAAGAAGTTTCTCGAGCCTATGGTGTGTATGAAGATCTACAAGGGTTCAAAGACACTTTGTCGATTGTCAGTGGCGTGTTGTTCGATGCTGAGGAAAAGAAAAACCAACATCATGCCTTGCATGAATGGCTAAGGCAGATTCAAAACATCTGCTTTGAGGCTGAAGATGTAATGGATGAATTTGAGTTGCTAGACAAGCAAAAGAAAGTTCAGAAAGCTTCTGGAAGCACACGAGTGAAGGTACGCCACTTCTTTTCTTCCTCTAATTCAGTTATTTTCCGTCCTAGGATGGCAGAACAAATCAAAGGGATTAGGGCTAGGTTGGATAAGGTGGCAGCTGATGGGGTCAGGTTTGGTCTTACAAGTGTTGATCCCGGACATTTTGTGCAACAAAGAGAAATGACATATCCTGATATTGATGCTTCAAGTGTGATAGGAAGGGAAGATGACAAAGATGAAATTATCCATCTTTTGATGCAGACACATCTTCACAGCAATTATGATGGTGATAGAAGTATGACTGTGATTCCAATAGTGGGAATTGGAGGATCAGGGAAGACCACACTTGCAAAATCGGTTTTCAATGATAAGAGAGTGGATCAACTTTTCGAGTTAAAGATGTGGGTGTGTGTCTCTAATGATTTCGACATGAAAAAGATAATCATTCAAATGATCAACTCTGCCGCCGTTTCCTTTTTAACTTCATCTTCCACACCATCAAGTTGTCTTGCTCACCAAGAAAACATCAACAACTTAGATATTGTGCAACTAGTAAGTCGTCTTAGATTAAAAGTTTTAGGTCAAAAGTTTTTAGTTGTATTAGATGACGTATGGAACGATGACCGTGCAAAGTGGCTTGAATTGAAAGATTTGATAAAAGTTGGCGCACCAGGAAGCAAAATTATAGTGACAACGCGTAGTAACTCAATTGCTAAGATGATGGGTGATGTTCCTTTGTGTGTTTTGGAAGGTCTTTGTCCAGAGGATTGTTTATCTCTATTTGTCAAATGGGCATTCAAGGAAGGGGAGGAAAAACAATATCCAAATCTAGTGGAGATCGGAAATGAAATTGTGAAAAAATGCCAGGGGATTCCACTAGCCGTGAGAACGTTAGCAAGTTCTCTCTTCTCAAACTTTGATATAAGCAAGTGGGAATATGTCCGAGACTCTGAGATGTGGAATTTAGAACAGAAGCAAGATGATATTTTACCTGCACTAAAATTAAGCTATGATCAAATGCCATCCTGCTTGAGGCACTGTTTTACTTATTTTTCCCTATATCCCAAAGATTATAACTTCAACAGTTATGAAATGTGTAGTCATTGGGTAGCCCTTGGATTAGTTCACTGCCATAATGAAAGTGAAACACTTGAGAGTATTGCAAGAAAATGTATTGATGAGTTGCAGTCAAGATCATTTATAATGGATGTAATTGATTTAGGCTTCATTTGTCATTTTAAAGTACATGATTTGATATATGATCTTGCATTGTATATTGCAAGAGAAGATTTTGCAGTAGTAGAATCGCATACTCGGAATATATCTCAGCACGTAAAGCATTTATCATTTGTTGAAAATGAGTCAGATGACCATGCTTTGTTCCCAAATTCTAGAAGTGTGAGAAGTATACTATTTCCCACCATGGGATTGGGTCTTGAAAGTGAAAGTGTTCTAGATACATGGGTGACAAGATACAAGTACTTGCGTTATTTAAATTTAAGTGATTCTTCATTTGAAACTATGTCCAATTCAATTTCAAAATTAGAACACCTACGTTTTCTCGATCTTTCTCGTAATGACAAAATCAGAACCCTCCCAAATTCCATTTGCAAACTCCTACATTTACAAGTGTTGATTCTCAGTGGGTGCACCATGCTTGAAAATTTGCCTAAAGGATTAGGAAAGCTAATCAGCCTTCGGCATCTTACTATAACCACAAAACAATCTGTTCTGCCACTTGGTGAATTTGAAAACTTGATCCATCTTCAAATTTTGAGTTTTCATTTTTGTGACAACTTAAAGTTTTTGTTCAGAACAAAACTCCCTTCCATTAGAGAATTGTATTTTGAATCATGTGGTTGCCTAGAGTCCTTACCTCTAAATATTTTCCCCAAATTACAGACTTTGTACATTAACAACTGTGACAAGTTAAACCTGTTGTTGAACAACGAATGTCCAGAACAAACATTGAGGATGAAACATTTGTATCTTATTGGTTTCTCAACACTTGTGACATTACCTGGATGGATTGCATGTGCCATGGATACTTTAGAGACCTTGGTAATCAGTAATTTATCTGGTCTTAAGATGCTTCCGGTGTTTCTAACTACAATGACTCGTCTTAAGAGGCTCTACATAACTAACTGTTCTCAACTCTTGGGTTTTACAAGTGACATGCGTCACCTCACCGCCCTTGAAGATTTTCGCATAAAAGGTTGTCCTGTGTTGTGCAGCAGATGTCAGCCCCTATATGGTGAGTATTGGCCCATGATTTCTCACATCAAATCTACTTTCATTGGAAAAGTAACAATAGAGGAGGAGGAGTTACTAGGAGGTTATCCATTTTGA 2634 0.3789 MAESFLFDIASSLLGKLASYAYEEVSRAYGVYEDLQGFKDTLSIVSGVLFDAEEKKNQHHALHEWLRQIQNICFEAEDVMDEFELLDKQKKVQKASGSTRVKVRHFFSSSNSVIFRPRMAEQIKGIRARLDKVAADGVRFGLTSVDPGHFVQQREMTYPDIDASSVIGREDDKDEIIHLLMQTHLHSNYDGDRSMTVIPIVGIGGSGKTTLAKSVFNDKRVDQLFELKMWVCVSNDFDMKKIIIQMINSAAVSFLTSSSTPSSCLAHQENINNLDIVQLVSRLRLKVLGQKFLVVLDDVWNDDRAKWLELKDLIKVGAPGSKIIVTTRSNSIAKMMGDVPLCVLEGLCPEDCLSLFVKWAFKEGEEKQYPNLVEIGNEIVKKCQGIPLAVRTLASSLFSNFDISKWEYVRDSEMWNLEQKQDDILPALKLSYDQMPSCLRHCFTYFSLYPKDYNFNSYEMCSHWVALGLVHCHNESETLESIARKCIDELQSRSFIMDVIDLGFICHFKVHDLIYDLALYIAREDFAVVESHTRNISQHVKHLSFVENESDDHALFPNSRSVRSILFPTMGLGLESESVLDTWVTRYKYLRYLNLSDSSFETMSNSISKLEHLRFLDLSRNDKIRTLPNSICKLLHLQVLILSGCTMLENLPKGLGKLISLRHLTITTKQSVLPLGEFENLIHLQILSFHFCDNLKFLFRTKLPSIRELYFESCGCLESLPLNIFPKLQTLYINNCDKLNLLLNNECPEQTLRMKHLYLIGFSTLVTLPGWIACAMDTLETLVISNLSGLKMLPVFLTTMTRLKRLYITNCSQLLGFTSDMRHLTALEDFRIKGCPVLCSRCQPLYGEYWPMISHIKSTFIGKVTIEEEELLGGYPF* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1473 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 445 IPR027417 -
Tpr6g1473 877 CDD RX-CC_like 2 134 IPR038005 -
Tpr6g1473 877 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 790 - -
Tpr6g1473 877 Gene3D - 347 430 IPR042197 -
Tpr6g1473 877 PRINTS Disease resistance protein signature 197 212 - -
Tpr6g1473 877 PRINTS Disease resistance protein signature 286 300 - -
Tpr6g1473 877 PRINTS Disease resistance protein signature 383 397 - -
Tpr6g1473 877 PRINTS Disease resistance protein signature 608 624 - -
Tpr6g1473 877 Gene3D - 431 520 IPR036388 -
Tpr6g1473 877 Gene3D Ribonuclease Inhibitor 554 848 IPR032675 -
Tpr6g1473 877 Gene3D - 10 124 - -
Tpr6g1473 877 SUPERFAMILY L domain-like 509 864 - -
Tpr6g1473 877 PANTHER DISEASE RESISTANCE PROTEIN RP 6 790 IPR044974 GO:0006952
Tpr6g1473 877 Gene3D - 153 339 IPR027417 -
Tpr6g1473 877 Pfam NB-ARC domain 190 433 IPR002182 GO:0043531
Tpr6g1473 877 Pfam Rx N-terminal domain 11 97 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1473 Tpr-Chr6 15843811 15847507 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1473 198 840 WRKY Transcription Factor Family AT5G45050 23.440 5.37e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1473 - - mtr:MTR_7g091140 1258.43