Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1472 ATGGCAGAATCATTTGCATTTGATATTGCTAATTCACTCTTATGTAAACTTGCTTCTTATGCTTATGAAGAAGCTTCTCGAGCCTATGGTGTGTATAAAGATCTTCAAGGGATCAAAGACACTCTCTCAATTGTCAGTGGCGTGCTATTAGATGCTGAGTACAAGAAAGACCAAAAGCACGGGCTACGTGAATGGCTGAGGCAGATTCATAATATATGTTCTGATGCTGAAAATGTATTCGATGGATTTGACTTGCAGGACAAGCGAAAACAAGTCTTGGAAGCTTCTGGAAGCACACGGACGAAGGTACACCATTTATTTTCTTCGTCCAATCCACTTGCATTCCGTTTTAGAATGGCGCGTCAAATTAAAGAGATTAGAGATAGATTGAATAAAGTGGCAGCTGATGGGACCATGTTTGGACTTGCAACCATCAATGTCGATCCCAGACTTGTTGTTCAAAGGAGAGAAATGACGTATCCTCATGTCGATGCTTCAAGTGTCGTAGGAAGAGAGAGTGATAGGGAAGAAATTATCAAGCTTTTAATAAAACCACATCCTCAAGGTGATGGTGATGGTGATAAAAGATTGTGTGTTATTCCCATAGTGGGAATTGGTGGCTTGGGGAAAACCACACTTGCCAAGCTTGTGTTTAACGATACAAGGATGGATAAACTTTTTCAACTGAAGATGTGGGTGTGTGTCTCTGTTGATTTTGACATCAATCAGATAATAATTAAAATCATCAACTCTATCCAAAAAATTAAAATCATCAACTCCGCCAATACTTCCACTTTTTCTTCATCTTCCGCGTCAATGAGTAGTTTTGATCACCAAGAAAACATAAACAATTTAGATATGGTACAACTAGTAAGTCTTCTGATAAAAAAACTTTATGGTAAAAAGTTTTTACTCGTGTTAGATGATGTATGGAATGAAGATCGTGCTAAGTGGATTGAGTTGAAAGATTTGATAAAAGTTTGTGCATCAGGAAGCAAAATTGTGGTGACAACACGTAGTAAATCAATTGCTTCGATGATGGGTAATGTTCCTGCATACATTTTGAAAGGCCTTTCTCGAACGAATTGTTTATCTTTGTTTGTCCAATGGGCATTCAAGGAAGGCGAAGAAGAAAAATATCCAAATCTAGTAGAGATCGGAAAAGAAATTGTGAAAAAATGCCAAGGGGTTCCGTTAGCTGTGAGAACATTAGGAAGTTCCCTCTTCTCAAACTTCGATTTAAGTAAGTGGGAATTTGTTAGAGACTCCGAGATATGGAATTTAGAACAAAAGAAAGACGGCATTTTATCTGCACTAAAATTAAGTTATGATCAAATGTCATCCTATTTGAGACAATGTTTTGTCTGTTTTTCCCTTTTTCCCAAAGATCATATCTTCAATAGTGATGTAATGTGTAGTCTTTGGGTAGCCCTTGGATTAGTTCAATCCCTAAACGGAAGTGAGAAGCTAGAGAGTATTGCAAGAGAATATATTGATGAGTTGCATTCAAGATCGTTTCTTCAAGATGTCGATGACTACGGATCCTATTGCGAGTTCAAAGTACATGATTTGATACATGATCTTGCATTGTATTTTGCAAGAGAGGACTTTGTAGCGATAGACTCGCATACTCAGAATATACCTCTGCAAGTAAGGCATTTATCAGTTATTGAAAATGATTCACTTGACCATGGTTTGTTCCCGAAGTCTAGAAGTTTGAGAACTATACTATTTCCCAACCTCGGAGTGGGTCTTGCAAGTGAAAGTGTTCTAGATACATGGTTATCAAGATACAAATACTTGCGTTATTTAAATTTAAGTGATTCTTCATTTGATACTGTGTCAAATTCAATTACAAAGTTAGAGCATTTGCGTTTTCTTGATCTTTCTCGTAATACGAAAATCAAAAGATTACCAAATTCCATTTGCAAACTCCTAAATTTGCAAGTTTTGTCGGTTAGCGGGTGCACGGAGCTTCAAAAAATGCCTAAAGGATTAGGCAAGCTTATCAGCCTTCAACGTCTTACTATAACCACAAAACAATCTGTTCTGCCACAGGGTGAATTTGAAAGGTTGATCCATCTTCAAACTTTAAGTTTTCATATTTGTGATAATTTGAAGTTTTTGTTCAGACAAAAACTCCCTTCCATTGAAGCATTGTATTTTTATTCATGTCGGTGTTTAGAGTCCATACCTCTCTATATTTTCCCTAAATTACAGACTTTGTACATTAGCAACTGTGAGAAGTTAAACCTATTGTCGAACAATGAAAGTCCAAAGCAAAGATTGATGATGAAACATTTGTACCTCGTTGGATTTCCAATGTATCAGACATTGCCTGGATGGATTTTATATGCCCGGGAAACTTTAGAGACCTTGGAAATTAATTGTTTTCCTAATCTTAAGATGCTTCCTGAGTATCTAACTACAATGACTCGTCTTAAGAGGCTCTATATTATTGGTTGTCATCAACTGTTGGATCTTCCAAGCGACATGCATCGCCTCACTTCCCTTGAAGATTTGCGCATAATTGATTGCCCTGAATTAAATCGGAAATGTCAGCCCCAATCTGGTGAGTACTGGCCCATGATTTGTCATATCAAGAGCATTTTCTTTAATGAACCAGGAGGAGAGAAGAAGGAATGA 2646 0.3719 MAESFAFDIANSLLCKLASYAYEEASRAYGVYKDLQGIKDTLSIVSGVLLDAEYKKDQKHGLREWLRQIHNICSDAENVFDGFDLQDKRKQVLEASGSTRTKVHHLFSSSNPLAFRFRMARQIKEIRDRLNKVAADGTMFGLATINVDPRLVVQRREMTYPHVDASSVVGRESDREEIIKLLIKPHPQGDGDGDKRLCVIPIVGIGGLGKTTLAKLVFNDTRMDKLFQLKMWVCVSVDFDINQIIIKIINSIQKIKIINSANTSTFSSSSASMSSFDHQENINNLDMVQLVSLLIKKLYGKKFLLVLDDVWNEDRAKWIELKDLIKVCASGSKIVVTTRSKSIASMMGNVPAYILKGLSRTNCLSLFVQWAFKEGEEEKYPNLVEIGKEIVKKCQGVPLAVRTLGSSLFSNFDLSKWEFVRDSEIWNLEQKKDGILSALKLSYDQMSSYLRQCFVCFSLFPKDHIFNSDVMCSLWVALGLVQSLNGSEKLESIAREYIDELHSRSFLQDVDDYGSYCEFKVHDLIHDLALYFAREDFVAIDSHTQNIPLQVRHLSVIENDSLDHGLFPKSRSLRTILFPNLGVGLASESVLDTWLSRYKYLRYLNLSDSSFDTVSNSITKLEHLRFLDLSRNTKIKRLPNSICKLLNLQVLSVSGCTELQKMPKGLGKLISLQRLTITTKQSVLPQGEFERLIHLQTLSFHICDNLKFLFRQKLPSIEALYFYSCRCLESIPLYIFPKLQTLYISNCEKLNLLSNNESPKQRLMMKHLYLVGFPMYQTLPGWILYARETLETLEINCFPNLKMLPEYLTTMTRLKRLYIIGCHQLLDLPSDMHRLTSLEDLRIIDCPELNRKCQPQSGEYWPMICHIKSIFFNEPGGEKKE* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1472 881 Gene3D Ribonuclease Inhibitor 566 861 IPR032675 -
Tpr6g1472 881 CDD RX-CC_like 2 134 IPR038005 -
Tpr6g1472 881 Pfam Rx N-terminal domain 11 98 IPR041118 -
Tpr6g1472 881 Gene3D - 10 124 - -
Tpr6g1472 881 PANTHER DISEASE RESISTANCE PROTEIN RP 6 766 IPR044974 GO:0006952
Tpr6g1472 881 PRINTS Disease resistance protein signature 199 214 - -
Tpr6g1472 881 PRINTS Disease resistance protein signature 394 408 - -
Tpr6g1472 881 PRINTS Disease resistance protein signature 619 635 - -
Tpr6g1472 881 Pfam NB-ARC domain 194 444 IPR002182 GO:0043531
Tpr6g1472 881 SUPERFAMILY L domain-like 511 862 - -
Tpr6g1472 881 Gene3D - 448 530 IPR036388 -
Tpr6g1472 881 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 766 - -
Tpr6g1472 881 Gene3D - 153 351 IPR027417 -
Tpr6g1472 881 Gene3D - 357 447 IPR042197 -
Tpr6g1472 881 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 456 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1472 Tpr-Chr6 15835074 15838257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1472 200 825 WRKY Transcription Factor Family AT5G45050 23.249 9.00e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1472 - - mtr:MTR_7g091140 1241.87