Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1471 ATGGCTGAATCATTTGTCTTATTAGATGTTGCTGATTCACTCCTAGGGAAGCTTGCTTCTTATACTTATGAAGAAGCTTCTCAAGCCTATGGTGTATATGAAGATCTACAAGGGTTCAAAGATACTTTATCGATTGTCAGTGGTGTGCTGTTGGATGCTGATCACAAGAAGGACCAAAAGCATGGGCTGCGTGAATGGCTAAAGCAGATTCAAAACATTTGCTATGATGCTGAAGACATATTGGATGGATTTGAGTTGCAACACAAGCGAAACCAAGTTGTCAAATGCGGCAGCACCAAGATGAAGGTACGCCACTTGTTTTCTTCCTCTAATCCACTTGCCTTCCGTCTTAGGATGGCGCGTAAAATCAAAGAGATAAGGGGCAGGTTGGATAAGGTAGTGGCTGATGGTACTAAGTTTGGACTTGCGAGTTTTGATTCCGGACTTATTATGCAAGGAAGAGAAATGACTTATCCGGATGTTGATGCTTCAAGTGTAATAGGAAGGGAAATTGATAAAGATGAAATTATCAAGCTTTTGATGCAACCATTTCCTCAGCGTGGTGATGATGGTGATCAAAGTATCTGTGTCATTTCCATAGTGGGAATTGGAGGATTGGGGAAGACCACACTTGCAAAGTTGATATTCAATGATAAGAGGATGGATGATCTTTTTCAATTGAAGATGTGGGTGTGTGTCTCTGATAATTTTGACATCAGGCAGATAATCATTAAAATCATCAACTCTGCCACTGCTTCTTTTTTTACTTCAGCTTCCGCTCCAACGAGTGGTCTTGCTTACCCAGAAAACATTACCAACTTAGATATTGTGCAACTAGTAAGTTGTATGAGACAAAAACTTTCTGGTCAAAAGTTTTTACTGGTGTTAGATGATGTATGGAATGATGATCGTGCAAAGTGGATTGAGTTGAGAGATTTGATAAAAGTTGGACCACCAGGAAGCAAAATTGTGGTGACAACACGCAGTAAATCAATTGCTTCAATGATGGGTAATGTTCCCTCCTATGTTTTGGAAGGTCTTTCTCCAACGGATTGTTTGTCTCTATTTGTCAAATGGGCATTCAAGGAAGGAAAAGAAGAAAACTATCCAAATCTAGTAGAGATCGGAAAAGAAATCGTGAAAAAATGCCAAGGGGTTCCACTAGCCCTGAGAACATTGGGAAGTTCCCTCTTCTCAAACTTTGATTTAAGTAAGTGGGAATTTGTCAGAGACTCAGAAATGTGGAATTTGGAACAAAAGGAACATGATATTTTACCTGCACTAAAATTAAGCTATGATCAAATGCCGTCCTATCTGAGACAATGTTTTGCTTATTTTTCCCTTTATCCCAAAGATCATATCTTCAATACTTATGTAATGTGTAGTCTTTGGATAGCCCTTGGATTAGTTCAATCCTTAAATGGAAGTGAAAAGCTAGAGCATGTTGCAAGAAATTATATTGATGAGTTACATTCAAGATCATTTCTTCAGGATGTCGATGACTTTGGCTCCTCTTGCGAGTTCAAAATACATGATTTGATACATGATCTTGCATTGTATGTTGCAAGAGAGGACTTTGTAGCAGTAGACTCGCATATTCAGAATATACCTCCGCAAGCAAGGCATTTATCAGTTGTTGAAAATGATTCGCTTGACCATTATTTATTCCCCAAGTCCAAATATTTGAGAAGTATATTATTTCCCATCCACGGAGTGGGTCTTGCAAGTGAAAGGGTTCTAGATACATGGGTATCAAGATACAAATACTTGCGTTACTTAGATTTAAGTGATTCTTCAATTAAGATTCTGCCAAATTCACTTACAAAATTGGGGCACCTGCGTTTTCTCGATCTTTCTCGTAATGACAGGATCAAAAGACTTCCAAATTCCATTTGCAAACTTCTAAATTTGCAAGTTTTGTTGCTTAGTGGGTGCATTGAGCTTGAAGAATTGCCTAAAGGAATAGGGAAGTTGATTAGTCTTCGTCGTCTTATTGTCACCACAAAACAGTCTACTCTGCCACATGATGAATTTGCTAGTTTGAACCATCTTCAATCTTTGAGTTTTCATGATTGTGACAATTTGAAGCTTATGTTCAGACAACAACTCCCGTCCATTGAAGAACTACATTTTGAATCATGTGGGAGTCTCGAAAGCTTACCTCTTTACATTTTTCCTAAACTACAGACTCTGTTTATTAATGATTGTCAGATGTTAAACATGTCATTGAACAACGAAAGCCCAATCCAAAAGTTGAGGATGAAATATTTGATGCTTATGAATTATCCGGGGCTTCTGGCATTGCCTAGGTGGACTGTAGGTATTGCAGACACATTAGAGACCTTGCTAATTTCTGATTTGCCAGATCTTGAGATGCTTCCCGAGTGTTTAACAACAATGTTTAATCTTAAGAGGATATATATTCATAACTGTCCTCAATTGTTATGTCTTCCAAGTGACATGCATCACCTCACGGCTCTTGAAGATTTGCGCATAGTTGATTGCCCTGAATTATGCCGAAAATGTTTGCCTCAATCTGGTGAGTATTGGCCCATGATTTCTCATATCAAGGGCATTTTCATTGAAGAACCAAGAGGAGAGGCGGAATGA 2610 0.3858 MAESFVLLDVADSLLGKLASYTYEEASQAYGVYEDLQGFKDTLSIVSGVLLDADHKKDQKHGLREWLKQIQNICYDAEDILDGFELQHKRNQVVKCGSTKMKVRHLFSSSNPLAFRLRMARKIKEIRGRLDKVVADGTKFGLASFDSGLIMQGREMTYPDVDASSVIGREIDKDEIIKLLMQPFPQRGDDGDQSICVISIVGIGGLGKTTLAKLIFNDKRMDDLFQLKMWVCVSDNFDIRQIIIKIINSATASFFTSASAPTSGLAYPENITNLDIVQLVSCMRQKLSGQKFLLVLDDVWNDDRAKWIELRDLIKVGPPGSKIVVTTRSKSIASMMGNVPSYVLEGLSPTDCLSLFVKWAFKEGKEENYPNLVEIGKEIVKKCQGVPLALRTLGSSLFSNFDLSKWEFVRDSEMWNLEQKEHDILPALKLSYDQMPSYLRQCFAYFSLYPKDHIFNTYVMCSLWIALGLVQSLNGSEKLEHVARNYIDELHSRSFLQDVDDFGSSCEFKIHDLIHDLALYVAREDFVAVDSHIQNIPPQARHLSVVENDSLDHYLFPKSKYLRSILFPIHGVGLASERVLDTWVSRYKYLRYLDLSDSSIKILPNSLTKLGHLRFLDLSRNDRIKRLPNSICKLLNLQVLLLSGCIELEELPKGIGKLISLRRLIVTTKQSTLPHDEFASLNHLQSLSFHDCDNLKLMFRQQLPSIEELHFESCGSLESLPLYIFPKLQTLFINDCQMLNMSLNNESPIQKLRMKYLMLMNYPGLLALPRWTVGIADTLETLLISDLPDLEMLPECLTTMFNLKRIYIHNCPQLLCLPSDMHHLTALEDLRIVDCPELCRKCLPQSGEYWPMISHIKGIFIEEPRGEAE* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1471 869 Gene3D - 11 124 - -
Tpr6g1471 869 SUPERFAMILY L domain-like 509 853 - -
Tpr6g1471 869 CDD RX-CC_like 2 133 IPR038005 -
Tpr6g1471 869 Gene3D - 347 430 IPR042197 -
Tpr6g1471 869 Gene3D Ribonuclease Inhibitor 555 857 IPR032675 -
Tpr6g1471 869 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 445 IPR027417 -
Tpr6g1471 869 Pfam Rx N-terminal domain 12 98 IPR041118 -
Tpr6g1471 869 PRINTS Disease resistance protein signature 197 212 - -
Tpr6g1471 869 PRINTS Disease resistance protein signature 286 300 - -
Tpr6g1471 869 PRINTS Disease resistance protein signature 383 397 - -
Tpr6g1471 869 PRINTS Disease resistance protein signature 608 624 - -
Tpr6g1471 869 PANTHER DISEASE RESISTANCE PROTEIN RP 9 755 IPR044974 GO:0006952
Tpr6g1471 869 Pfam NB-ARC domain 191 433 IPR002182 GO:0043531
Tpr6g1471 869 Gene3D - 431 520 IPR036388 -
Tpr6g1471 869 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 9 755 - -
Tpr6g1471 869 Gene3D - 155 341 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1471 Tpr-Chr6 15829919 15833281 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1471 195 838 WRKY Transcription Factor Family AT5G45050 22.576 1.09e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1471 - - mtr:MTR_7g091140 1263.06