Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1463 ATGAGTATCTCTTTGGGAGACAGAGTTGCATCTTCATTTGACGAGGAAATAAGTGAAGGAAGTAAAAAAAATGATGATATTTTAGATAAAAAATTGCCTTATGATGGTGAAAATCCTAGGGCTGGGATGACATTTAGCTCTGAAGATGAAGCTACCGACTATTACATGAATTATGCTCGTTGTATGGGTTTTGGATTTCGTAAAATCAGTTCAAAAAATGGAGATGATGGAAAAAGATATTTTACTTTAGGATGTAGTCGAGCAAGAAAGTATGTGAGCAATTCAAAGAATCTTTTGAAGCCAAATCCTATTACAAAAACACAATGCAAGGCTAGATTGAATGCCTGTATGTCTTTAGAAGGAACAGTTACAATTTCAAGTGTTATTCTTGAGCATAATCATGAATTAAGCCCAACAAAAGCACGGTATTTTAGATGCAATAAGAATTTGGGGCCTTATATGAAAAGGAGATTGGAACTTAATGATCAAGCTGGAATTAACGTAAGCAGAAACTTTCGATCATTGGTTGTTGAAGCTGACGGTTATGAGAATCTTAGTTTTGGCGAAAAAGATTGTAGAAATTATATAGATAAAGTACGACGGCTACGACTTGGAACAGGGGATGCTGATGCTATTCAAAACTATTTTGTTAGGATGCAAAAACAAAATAGTCAATTTTATTATGTAATGGATTTGGATGATGAAAGTCGTTTACAGAATGTGTTTTGGGCAGATGCGAGATCTAGAGCTGCATATGAATATTTTGGTGAAGTCATAACGTTTGACACCACTTATTTGACAAACAAATATGACATGCCTTTTGCCCCTTTTGTTGGGGTGAATCATCACGGTCAGTCTATTCTATTAGGTTGTGCTTTGTTGTCGAATGAGGATACTGAAACTTTTACTTGGTTATTCAAAACATGGCTGGAATGTATGCAAGGACATGCACCAAATGCCATAATTACCGATCAAGATAGAGCAATGAAGAATTCAATTGAGGTTGTCTTTCCGAAAGCTCGTCATCGATGGTGCTTGTGGCATATAGAGCTGTCAAAATGGTGGCATATAATGAAAAAGGTTCCAGAAAAATTAGGTAGACACTCTGATTATGAGTCTATCAAAACACTCTTGCATGACATTGTATATGATTCTTGGAGTAAAAGTGATTTTGTAGAGAAGTGGGAAAAAATGGTGGGATATTATGAACTTCAAGATAATGAATGGTTGAAAGGGCTATTTGATGAACGAAATCGTTGGGTTCCTGTGTATGTGAGAGACACGTTTTGGGCTGGAATGTCAACTACACAAAGAAGTGAAAGTATGAACTCTTTTTTTGATGGGTATGTAAACTCAAAGACAGCACTTAAACAATTTGTTGAACAATATGACAATGCATTAAAAGACAAAATTGAGAAGGAAAACTTGGCTGATTTTAATTCATTTAATGCTACAATTGCTTGTGTAAGTCATTTTGGTTTTGAATCTCAATTCCAAAATGCATTCACTAATGCAAAATTCAAAGAATTTCAAGCTGAGGTTGCTTCTCTGATGTATTGCCATACTTTATTTGAAAGATCGGAGGGCTTGATTTCAATATTTTCTGTTACAGAAAATAAGAAAGTTTTCAATAAAACTCAAGACATAGTTTTCAAGGTATTCTTCAATGAGAAAGACTTTGAATTACAATGCACTTGTTGTTTATTTGAGTTTAAAGGTATTTTATGTCGGCATATACTTTGTGTGCTTACACTCACTGGTAAAGCAGAGTCGGTGCCACCAGGTTATATTCTGTCACGATGGAGAAAGGATATAAGGCGGAGACACACTCTTATTAAATGTGGTTTTGATCATTCAGCTAGAAATCCTGGACTACAACGTGTTAACAAAGCATGTGATGCTTTCTACGAAGTTGCTTCTACAAGGATAAATACTGAAGATGATTTATCGAAAGTGATAAATTGGATTGAGCGCTTGAAAATTGAGTTACCGTGTAAAAACTCATCTTCCAAGATTGTAGAACAAGATGGTTATGTTCAAAACCATATGACTAGAATTCTTGATCCATTACCGACCCGATGTAAAGGGCGTCCTCCTTCAACAAGAAAGACTTCAAAAGTTGACCGAATTGTCAAAAACAAGATTGCTAGAAAGAAAACTCAAAAAAGAACCCAAAAGAGTAAAACTGATCAAAGTCAAGAAGAGGGCCTGTGTATCTCTAGAGTTCAAGAAATTGCAAATGAAAAATATTTTAGATCTCAAATTATTGATGGGATTGGAACACAAGAAAGCATTCAAGTAAATGGAATTTATTACTTTAATTTGATTCAACATTCTTGTTTATTTAAAATTGATCGACTAGTTTGA 2367 0.3469 MSISLGDRVASSFDEEISEGSKKNDDILDKKLPYDGENPRAGMTFSSEDEATDYYMNYARCMGFGFRKISSKNGDDGKRYFTLGCSRARKYVSNSKNLLKPNPITKTQCKARLNACMSLEGTVTISSVILEHNHELSPTKARYFRCNKNLGPYMKRRLELNDQAGINVSRNFRSLVVEADGYENLSFGEKDCRNYIDKVRRLRLGTGDADAIQNYFVRMQKQNSQFYYVMDLDDESRLQNVFWADARSRAAYEYFGEVITFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCALLSNEDTETFTWLFKTWLECMQGHAPNAIITDQDRAMKNSIEVVFPKARHRWCLWHIELSKWWHIMKKVPEKLGRHSDYESIKTLLHDIVYDSWSKSDFVEKWEKMVGYYELQDNEWLKGLFDERNRWVPVYVRDTFWAGMSTTQRSESMNSFFDGYVNSKTALKQFVEQYDNALKDKIEKENLADFNSFNATIACVSHFGFESQFQNAFTNAKFKEFQAEVASLMYCHTLFERSEGLISIFSVTENKKVFNKTQDIVFKVFFNEKDFELQCTCCLFEFKGILCRHILCVLTLTGKAESVPPGYILSRWRKDIRRRHTLIKCGFDHSARNPGLQRVNKACDAFYEVASTRINTEDDLSKVINWIERLKIELPCKNSSSKIVEQDGYVQNHMTRILDPLPTRCKGRPPSTRKTSKVDRIVKNKIARKKTQKRTQKSKTDQSQEEGLCISRVQEIANEKYFRSQIIDGIGTQESIQVNGIYYFNLIQHSCLFKIDRLV* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1463 788 Pfam FAR1 DNA-binding domain 53 137 IPR004330 -
Tpr6g1463 788 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 622 IPR031052 GO:0006355
Tpr6g1463 788 MobiDBLite consensus disorder prediction 1 21 - -
Tpr6g1463 788 Pfam SWIM zinc finger 555 583 IPR007527 GO:0008270
Tpr6g1463 788 ProSiteProfiles Zinc finger SWIM-type profile. 551 587 IPR007527 GO:0008270
Tpr6g1463 788 Pfam MULE transposase domain 258 350 IPR018289 -
Tpr6g1463 788 PANTHER OS03G0843700 PROTEIN 27 622 - -
Tpr6g1463 788 SMART 26again6 562 589 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1463 Tpr-Chr6 15773136 15776868 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr6g1463 MULE 4.4e-35 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1463 - - cam:101506732 1079.7