Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1444 ATGCATAAGGTTCTAAAAACTGTAGTTGATCTTTTCAGGAGGAGGAAAGATGATCTCATTACATTTGATCAAGACCGTTACACGAGATCGATCAATCTGAAACGACATTGCTTTGGAGAATTTTCTATGGCTAATGCTCAAGCCAATGCAATTATGGAAGATCAAAGCCAAGTTGAAGTTGCCTCTCAGTATGCACTCTATCTTGGAGTTTACGACGGCCATGGTGGCGTCGAAGCATCTCTCTATGTTCTTAATAACCTCTTCAACAATCTATTGAGGTTTGCTCATGAGAATGATGATGCTATAGCAGATAGTTTGAGGAATGCTGTTGCAGATACTGAAAATGGATTTTTGGATTATGTGGAAAATAATATTGGTCTAATTCGGACGATCGGAAAAGTTGGTTCATGCTGTCTTGCTGGGGTTTTGTGGAATGGTGTGCTGTATATCGCGAATCTTGGAGATTCCCGTGCTGTAATTGGTTCTGTGGTTAACAAAAGAGTCAGTGCTGTACAATTGACAACAGATCACAACTGTAATGATCCGGTTATTCGAGAAGAACTCATCTCATTGCATCCCGGTGATCCTACCATTGTGATGGAGCAGAACGGGTGGCGCGTCAAAGGCATCAGTATGGTAAGTAGAAGTATTGGTGATGCATATTTGAAGAGGCCTCAATTTTTGTTGCCGACATACGAAGAAGTTCCTCATCCTTTTGATAGAGGAGTGCTATCAGCAGAACCAGAGATGCTTACTAGAGTTATAGAAGAAACTGATAAGTTTCTTATATTTGCTTCTGATGGACTTTGGGAGCTCATGACAAATGATGAGGCAGTTCAAATTGTTCATAAGAATCCAAGAAAGGGAATTGCGAAGAGGCTTGTGACTACTGCTCTAGTGGAAGCTGCTAGAAGAAGGGGTATTACCTATAGGGCCATGAAGACTGCGACTCCAGGAAAGGAAACTTGTGTTGGCAGGAGGACTTTTCACGATGACATAAGTGTGATAGTCGTGTTCTTAGACAACAAGACGCCACTTTTCAAAAAGCACTTACTTGATCTTTCCTACAGAGGATCAACCAACGGGAGTCAACCATCGGCCTTTGCACTGTCTGGATTAACTGCTACGGAATCGCACTCATTTACGGGGGATCTGAAAAAAAGTTTCATAAAACGGTTTAAGGGATCAACCTCAAAGGGTCGGAGCTCTCAGACTGAGCATCTGCGCCATCTTTATATGGGTCGGATTGATAGTGATGAGAGTTCGCAGACTGAGAGCTCTGTTAACTTTACTGGTTGA 1299 0.4226 MHKVLKTVVDLFRRRKDDLITFDQDRYTRSINLKRHCFGEFSMANAQANAIMEDQSQVEVASQYALYLGVYDGHGGVEASLYVLNNLFNNLLRFAHENDDAIADSLRNAVADTENGFLDYVENNIGLIRTIGKVGSCCLAGVLWNGVLYIANLGDSRAVIGSVVNKRVSAVQLTTDHNCNDPVIREELISLHPGDPTIVMEQNGWRVKGISMVSRSIGDAYLKRPQFLLPTYEEVPHPFDRGVLSAEPEMLTRVIEETDKFLIFASDGLWELMTNDEAVQIVHKNPRKGIAKRLVTTALVEAARRRGITYRAMKTATPGKETCVGRRTFHDDISVIVVFLDNKTPLFKKHLLDLSYRGSTNGSQPSAFALSGLTATESHSFTGDLKKSFIKRFKGSTSKGRSSQTEHLRHLYMGRIDSDESSQTESSVNFTG* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1444 432 Pfam Protein phosphatase 2C 65 307 IPR001932 -
Tpr6g1444 432 PANTHER ALPHABET, ISOFORM E-RELATED 24 349 - -
Tpr6g1444 432 Gene3D - 16 345 IPR036457 -
Tpr6g1444 432 ProSiteProfiles PPM-type phosphatase domain profile. 37 340 IPR001932 -
Tpr6g1444 432 SUPERFAMILY PP2C-like 31 342 IPR036457 -
Tpr6g1444 432 SMART PP2C_4 25 338 IPR001932 -
Tpr6g1444 432 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 24 349 - -
Tpr6g1444 432 CDD PP2Cc 38 340 IPR001932 -
Tpr6g1444 432 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1444 Tpr-Chr6 15580301 15582377 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1444 30 370 PP2C-type Phosphatase Gene Family AT5G06750 49.288 2.65e-107 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1444 K01102 - csv:101222146 327.405