Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1443 ATGACCTCTCCCGCTTCTATAAAATCGAAAAAGCAAACCCAAATTGAACACCAAAACAAAAAAAACATGGCGCCAAAACCAAAAAACTCCTCAATCTTCATCGGTAACTGCCAAATTACTGTCGAAGCCACCACTTTCACCTGCAATTCCACTTCCAACGATCTCTTAATCACTCTCCCTCGTAGCGGAAAGATCAAAGTATCTGATGTTTCTGGTAACCATAAAAACGCTTCTGAAGAAACTGAACGAGAGTTTGTGTTGCTTAATCCTAAAGATGTTGATGATATTAGCAAAGGATACATTCAGGAAGTATTAGAGATGTATATGACAGAGCTACCTGGAATGAATTATGCTGCGAATACTGGAAAGCAATCGAAGTTTCTTGAGAGATGTGTGACTAATGGGAAATATCGAACACTACTTCTGAAGTCCAATTTGACCGGAGATTTAGGGAAGGTTATTGCTGCAATTACTTATCAAATCATCCCTGCAGATACCCAATATGCAGAGATCCCACTTGCAGCTGTCAATGCAATCTATCAACGGAAGGGTATTGGTCATCTGTTGTTTCTAGAGCTACGGAAGAGACTTCAGAATGTTGGCATTCGCTCCATTTTTTGTTGGGGAGACAAAGAATCTGAAGGATTTTGGCTTAAACAGGGTTTTTCATCAATAGCACAGGTGGATACAAAAGGTAGAGCCCGCAGGCTACCTGTAAAAGCTGATATTCGCAAAGCATTATGCTTTCCTGGTGGTTCGACTCTCATGATTTTACACCTAAGGAAGGAATTGTTGGAGGACAATTCTAACTCTGGGAAGTGTCTCCCCTCACAGCCTCATCAGAATTCCTTTACACCTGCAATTGTTGAAAATGAGGGGCCTGAATCCTCAGGGGAACCACTCATTAATTTGAAAACTTCCCGTAGAACAGGCACAAATCAAAGTAAACCTAAGGCTTTGGTAAAAGTTGGAACTTCACGAGGACATGGAAAACTCAGTGGATTTGACAGTCAGAATCCTAAGAACTGCTGCAATGACACTGTTGCTTCTGCCAGAGCAAATGATGATAGACAAACAAGTGGTGCAGATTGTTCCCAGGATGGAAATAATGCTAATGTAGCAAATTGTTCTCAATCTACAAAAGTTGCAAAGAGGGCCTGGGAAGCTTCTTCATCCTCGTTGAAATCAAAGAGAGTGAGAGGAAGCCAGATAGCTGACTGTCATTCAGATTCTAGCTGGGGTTTTGTCTCAGAGGCTGATAGGACCAATCCTTGTTCTTTGGAAGCCCCTCATTGCAATACTGCAATTACAGAGAACTCAACAAAATGTATTGGAGACCATATGCATGTAGAAGCTCCCCTCAGCCTAAAACTGCAATCAACTAAACAATGCTTTAGAATCATGTTGATGAATATCACTGATGATGCTAAGAAAACACAGCTTGCAAAGGTGATTGAAGACCTTGGTGGCACTATTGCCTCTGATGGAAGCACAACCACACATGTTGTCACAGGACAAGTGAGAAAAACTCTGAATTTCTGTACCGCCCTCTGTTCCGGTGCTTGGGTGGTATCATCAAGTTGGTTAAAAGAAAGTTTTCGGAAAGGCAGATTTGTTGATGAATCACCTCACATTCTGAATGATAAGGATTATTTGTTGAAGTATAATTCAGATTTAAGAAGTGCAGTTTTCCGAGCAAAAGCTTGTCCCCGTGCTTTGTTTAAGGGGTATAATATATGTATTGCAGCTAATGTTGGAACTTCTGCAAAAACTCTGTCTGCTATTGTTAGGTCTGCTGGTGGTAATGTTATTAGTGGACTCGAAAAAGTAAATGAAGGATCAACAACAATCTTTGTGACTTGTGAAGAAGATATTGAAGAAGCAATCATGGCTTCAAAGAAAGGTATAAGGACTTTCAGCAGTGAGTGGTTTATGAACTGTGTCATGAGACAAGAGCTTGACTTGGAAGCCCCCCAATTAATAGAGTCCTTATGA 1995 0.4085 MTSPASIKSKKQTQIEHQNKKNMAPKPKNSSIFIGNCQITVEATTFTCNSTSNDLLITLPRSGKIKVSDVSGNHKNASEETEREFVLLNPKDVDDISKGYIQEVLEMYMTELPGMNYAANTGKQSKFLERCVTNGKYRTLLLKSNLTGDLGKVIAAITYQIIPADTQYAEIPLAAVNAIYQRKGIGHLLFLELRKRLQNVGIRSIFCWGDKESEGFWLKQGFSSIAQVDTKGRARRLPVKADIRKALCFPGGSTLMILHLRKELLEDNSNSGKCLPSQPHQNSFTPAIVENEGPESSGEPLINLKTSRRTGTNQSKPKALVKVGTSRGHGKLSGFDSQNPKNCCNDTVASARANDDRQTSGADCSQDGNNANVANCSQSTKVAKRAWEASSSSLKSKRVRGSQIADCHSDSSWGFVSEADRTNPCSLEAPHCNTAITENSTKCIGDHMHVEAPLSLKLQSTKQCFRIMLMNITDDAKKTQLAKVIEDLGGTIASDGSTTTHVVTGQVRKTLNFCTALCSGAWVVSSSWLKESFRKGRFVDESPHILNDKDYLLKYNSDLRSAVFRAKACPRALFKGYNICIAANVGTSAKTLSAIVRSAGGNVISGLEKVNEGSTTIFVTCEEDIEEAIMASKKGIRTFSSEWFMNCVMRQELDLEAPQLIESL* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1443 664 SUPERFAMILY BRCT domain 570 654 IPR036420 -
Tpr6g1443 664 Pfam Acetyltransferase (GNAT) family 145 222 IPR000182 GO:0016407
Tpr6g1443 664 PANTHER N-ACETYLTRANSFERASE 26 664 - -
Tpr6g1443 664 Gene3D - 83 236 - -
Tpr6g1443 664 CDD BRCT_PAXIP1_rpt6_like 573 654 - -
Tpr6g1443 664 Gene3D BRCT domain 571 663 IPR036420 -
Tpr6g1443 664 Gene3D BRCT domain 455 570 IPR036420 -
Tpr6g1443 664 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 463 545 IPR001357 -
Tpr6g1443 664 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 91 244 IPR000182 GO:0016407
Tpr6g1443 664 SMART BRCT_7 571 651 IPR001357 -
Tpr6g1443 664 SMART BRCT_7 455 536 IPR001357 -
Tpr6g1443 664 ProSiteProfiles BRCT domain profile. 467 546 IPR001357 -
Tpr6g1443 664 CDD NAT_SF 151 208 - -
Tpr6g1443 664 ProSiteProfiles BRCT domain profile. 569 661 IPR001357 -
Tpr6g1443 664 SUPERFAMILY BRCT domain 466 548 IPR036420 -
Tpr6g1443 664 MobiDBLite consensus disorder prediction 1 27 - -
Tpr6g1443 664 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 86 228 IPR016181 -
Tpr6g1443 664 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 26 664 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tpr6g1443 RTT107_BRCT_5 7.8e-07 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1443 - - gmx:100806087 903.279