Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1437 ATGCATAAGGTTCTACAAACTGTAGTTAATCTGTTCAAGAGGAAGAATGATGATCTCATTGCATTCGATGAAGACCCTTACACGAGATCGATCAATCTCGAACGACATTGTTTTGGAGAATTTTCTATGGCTAATGCTCAAGCCAATACAATTATGGAAGATCAAAGCCAAGTTGAAGTTGCCTCTCACAATGCACTCTATCTTGGAGTTTACGATGGCCATGGTGGCGTCGAAGCATCGCTCTATGTTCTTAATAACCTCTTCAACAATCTATTGAGGTTTGCTCATGACAATGATAACGCTATAGCTGAGGCGACTTTGCGGGAAGCAGTTGCGGATACCGAACGTAGATTTTTTGATTATGTGCTAAATAATATTGTTCAAATTCGGACGATCGGAAAAGTTGGTACATGCTGTCTTGCTGGGGTTTTGTGGAAGGGTGTGCTGTATATCGCAAATCTTGGAGATTCGCGTGCTGTAATAGGTTCCGTGGTTAACAGAAGAGTCAGTGCTGTACAATTGACAACAGATCACAACTGTAATGATCCGGTTATTCGAGAAGAACTCGTCTCATTGCATCCCGGTGATGATACCATTGTGATGGAGAAGAACGGGTGGCGCGTCAAAGGCATCATTATGGTTAGTAGAAGTATTGGTGATACATATTTGAAGAGGCCTCCATTTTTGTTGCCGGCTTCCTTCCCGTCGTACGAGAAAGTTCCTGATCCTTTTGAGAGAGGGGTGGTATCTGCAGAACCAGAGATGCTTACTAGAGTTATAGAAGAAACTGATAAGTTTCTTATATTTGCTTCTGATGGACTCTGGGAGCTCATGTCAAATGATCAAGCAGTTCAAATTGTTCATAAGAATCCAAGAAATGGAATTGCGAAGAGGCTTGTGACTACTGCTCTAGTGGAAGCTGCTAGAAGAAGGAATGTTAAATATAGGGCCATGATGACTACGACTCCAGGAAAGGAACCTAATGTTGGCAGGAGGACTTTTCACGACGATATAAGTGTGATCGTCGTGTTTTTGGACAACAAGACGCCGCTTATCAAGAAGCACGTACATGATCTTTCCTACAGAGGCTCAACTGATGGGAGTCAACCATCGGGCTTTGCACTGTCTGCATTAACTGTTGCGGAATCTCACTCATTTACGGGGGATCTTAAGAAAAGTTTCAAAAAACGGTTTAAGGGATCAACCTCAAAGGGTCAGAGCTCTAGGTCTGCTGAGGGTCTGCACCTGCTTCTTGATATGGAAGGGGACTCTGGGGATCAGACTGAGAGCTCTAAGGGAAAAAACCCTTGGGACCCTGTGAGAAAGCATCTGAAATGGAAGAAGCATTAA 1350 0.4333 MHKVLQTVVNLFKRKNDDLIAFDEDPYTRSINLERHCFGEFSMANAQANTIMEDQSQVEVASHNALYLGVYDGHGGVEASLYVLNNLFNNLLRFAHDNDNAIAEATLREAVADTERRFFDYVLNNIVQIRTIGKVGTCCLAGVLWKGVLYIANLGDSRAVIGSVVNRRVSAVQLTTDHNCNDPVIREELVSLHPGDDTIVMEKNGWRVKGIIMVSRSIGDTYLKRPPFLLPASFPSYEKVPDPFERGVVSAEPEMLTRVIEETDKFLIFASDGLWELMSNDQAVQIVHKNPRNGIAKRLVTTALVEAARRRNVKYRAMMTTTPGKEPNVGRRTFHDDISVIVVFLDNKTPLIKKHVHDLSYRGSTDGSQPSGFALSALTVAESHSFTGDLKKSFKKRFKGSTSKGQSSRSAEGLHLLLDMEGDSGDQTESSKGKNPWDPVRKHLKWKKH* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1437 449 Gene3D - 16 353 IPR036457 -
Tpr6g1437 449 MobiDBLite consensus disorder prediction 397 449 - -
Tpr6g1437 449 PANTHER ALPHABET, ISOFORM E-RELATED 12 363 - -
Tpr6g1437 449 SMART PP2C_4 25 343 IPR001932 -
Tpr6g1437 449 SUPERFAMILY PP2C-like 34 347 IPR036457 -
Tpr6g1437 449 ProSiteProfiles PPM-type phosphatase domain profile. 37 345 IPR001932 -
Tpr6g1437 449 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 12 363 - -
Tpr6g1437 449 CDD PP2Cc 38 345 IPR001932 -
Tpr6g1437 449 Pfam Protein phosphatase 2C 61 313 IPR001932 -
Tpr6g1437 449 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1437 Tpr-Chr6 15494877 15497052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1437 30 375 PP2C-type Phosphatase Gene Family AT5G06750 49.575 9.79e-107 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1437 K01102 - csv:101222146 331.643