Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1436 ATGCATAAGGTTCTACAAACTGTAGTTGATCTGTTCAAGAGGAAGAATGATGATCTCATTGCATTCGATGAAGACCCTTACACGAGATCGATCAAGCTCGAACGACATTGCTTTGGAGAATTTTCTATGGCTAATGCTCAAGCCAATACAATTATGGAAGACCAAAGCCAAGTTGAAGTTGCCTCTCACAATGCACTCTATCTTGGAGTTTACGATGGCCATGGTGGCGTCGAAGCATCGCTCTATGTTCTTAATAACCTCTTCAACAATCTATTGTCGTTTGCTCATGAGAATGATAACGCTATAACTGCGCTGACTTTGAGGGATGCGGTTGTGTATACTGAACGTTGTTTTTTGAATTATGTCAAAAATAATATTGTTCAAATTCGGACGATCGGAAAAGTTGGTTCTTGCTGTCTTGCTGGGGTTTTGTGGAAGGGTGTGCTGTATGTCGCGAATCTTGGAGATTCGCGTGCTGTAATTGGATCTGTGGTTGACAAAAGAGTCAGTGCTGTACAATTGACAAGAGATCACAATTGTAATGATCCAGGTATTCGACAAGAACTCAAATCAATGCATCCCGGTGATGATACCATTGTGATGGAGAATAATGGGTGGCGCGTCAAAGGCATCATTATGGTAAGTAGAAGTATTGGCGATGCATATTTGAAGAGACCTCCATTTTCGTTGCTGAATTCGTTCCCGACGTACGTAGAAGTTCCTCATCCTTTTGAGAGAGGAGTGGTATCTGAAGAACCAGAGATGCTTACTAGAGATATAGCAGAAACTGATAAGTTTCTTATATTTGCTTCTGATGGACTCTGGGAGCTCATGTCAAATGATCAAGCAGTTCAAATTGTTCATAAGAATCCAAGAAATGGAATTGCTAAGAGGCTTCTGACTACTGCTCTAGTGGAAGCTGCTAGAAGAAGGAATGTTAAATATAGGGCCATGATGACTACGACTCCAGGAAAGGAACTTAATGTTGGCAGGAGGACTTTTCACGACGATATAAGCGTGATCGTCGTGTTCTTGGACAACAAGACGCCGCTTATCAAGAAGCACATACATGATCTTTCCTACAGAGGCTCAACTGATGGGAGTCAACCATCGGGCTTTGCACTGTCTGCATTAACTGTCGCGGAATCGCACTCATTTACGGGGGATCTTAAGAAAAGTTTCAAAAAACGGTTTAAGGGATCAACCTCGAAGGGTCAGAGCTCTAGGACTGCTGAGGGTCTGCACCTTCTTGATATGGAAAGGACCTCTGGGGATCAGACTGAGAGCTCTAAGGGAAAAAGCCATTGGGACACTCTGAGAAAGCATCTGAAATGGAAGAAGCATTAA 1347 0.4276 MHKVLQTVVDLFKRKNDDLIAFDEDPYTRSIKLERHCFGEFSMANAQANTIMEDQSQVEVASHNALYLGVYDGHGGVEASLYVLNNLFNNLLSFAHENDNAITALTLRDAVVYTERCFLNYVKNNIVQIRTIGKVGSCCLAGVLWKGVLYVANLGDSRAVIGSVVDKRVSAVQLTRDHNCNDPGIRQELKSMHPGDDTIVMENNGWRVKGIIMVSRSIGDAYLKRPPFSLLNSFPTYVEVPHPFERGVVSEEPEMLTRDIAETDKFLIFASDGLWELMSNDQAVQIVHKNPRNGIAKRLLTTALVEAARRRNVKYRAMMTTTPGKELNVGRRTFHDDISVIVVFLDNKTPLIKKHIHDLSYRGSTDGSQPSGFALSALTVAESHSFTGDLKKSFKKRFKGSTSKGQSSRTAEGLHLLDMERTSGDQTESSKGKSHWDTLRKHLKWKKH* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1436 448 ProSiteProfiles PPM-type phosphatase domain profile. 37 345 IPR001932 -
Tpr6g1436 448 MobiDBLite consensus disorder prediction 398 436 - -
Tpr6g1436 448 PANTHER ALPHABET, ISOFORM E-RELATED 13 362 - -
Tpr6g1436 448 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 13 362 - -
Tpr6g1436 448 SMART PP2C_4 25 343 IPR001932 -
Tpr6g1436 448 Pfam Protein phosphatase 2C 61 313 IPR001932 -
Tpr6g1436 448 MobiDBLite consensus disorder prediction 414 436 - -
Tpr6g1436 448 CDD PP2Cc 38 345 IPR001932 -
Tpr6g1436 448 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Tpr6g1436 448 SUPERFAMILY PP2C-like 34 347 IPR036457 -
Tpr6g1436 448 Gene3D - 20 352 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1436 Tpr-Chr6 15483348 15489895 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1436 30 375 PP2C-type Phosphatase Gene Family AT5G06750 48.159 2.05e-104 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1436 K01102 - csv:101222146 331.643