Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1434 ATGCATAAGGTTCTACAAACTGTAGTTGATCTGTTCAGGAGGAGGAATGATGATCTCATTGCATTCGATGAAGACCCTTACACGAGATCGATCAATCTCGAACGACATTGCTTTGGAGAATTTTCTATGGCTAATGCTCAAGCCAATACAATTATGGAAGATCAAAGCCAAGTTGAAGTTGCCTCTCACAATGCACTCTATCTTGGAGTTTACGATGGCCATGGTGGCGTCGAAGCATCGCTCTATGTTCTTAATAACCTCTTCAACAATCTATTGAGGTTTGCTCATGAGAATGATAACGCTATAACTGAGGCGACTTTGATGAATGCGGTTGCTGATACCGAACGTGGATTTTTTGATTATGTGCTAAATAATATTGTTCAAATTCAGACGATCGGAAAAGTTGGTTCATGCTGTCTTGCTGGGGTTTTGTGGAAGGGTGTGCTGTATATCGCAAATCTTGGAGATTCGCGTGCTGTAATTGGTTCTGTGGTTGACAAAAGAGTCACTGCTGTAAAATTGACAACAGATCACAACTGTAATGATCCGGTTATTCGAGAAGAACTCAAATCAATGCATCCCGGTGATGATACCATTGTGATGGAGAAGAATGGGTGGCGCGTCAAAGGCATCATTATGGTTAGTAGAAGTATTGGTGATACATATTTGAAGAGGCCTCCATTTTTGTTGCCGGCTTCCTTCCCGACGTACGAGAAAGTTCCTGATCCTTTTGAGAGAGGGGTGGTATCTGCAGAACCAGAGATGCTTACTAGAGTTATAGAAGAAACTGATAAGTTTCTTATATTTGCTTCTGATGGACTCTGGGATCTCATGTCAAATGATGAGGCAGTTCAAATTGTTCATAAGAATCCAAGAAATGTAAGTATATATCTATGCCTTGTTCTTTCTTAG 912 0.4079 MHKVLQTVVDLFRRRNDDLIAFDEDPYTRSINLERHCFGEFSMANAQANTIMEDQSQVEVASHNALYLGVYDGHGGVEASLYVLNNLFNNLLRFAHENDNAITEATLMNAVADTERGFFDYVLNNIVQIQTIGKVGSCCLAGVLWKGVLYIANLGDSRAVIGSVVDKRVTAVKLTTDHNCNDPVIREELKSMHPGDDTIVMEKNGWRVKGIIMVSRSIGDTYLKRPPFLLPASFPTYEKVPDPFERGVVSAEPEMLTRVIEETDKFLIFASDGLWDLMSNDEAVQIVHKNPRNVSIYLCLVLS* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1434 303 SMART PP2C_4 25 302 IPR001932 -
Tpr6g1434 303 CDD PP2Cc 38 295 IPR001932 -
Tpr6g1434 303 PANTHER ALPHABET, ISOFORM E-RELATED 16 293 - -
Tpr6g1434 303 ProSiteProfiles PPM-type phosphatase domain profile. 37 303 IPR001932 -
Tpr6g1434 303 SUPERFAMILY PP2C-like 34 289 IPR036457 -
Tpr6g1434 303 Pfam Protein phosphatase 2C 61 290 IPR001932 -
Tpr6g1434 303 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 16 293 - -
Tpr6g1434 303 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Tpr6g1434 303 Gene3D - 22 299 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1434 Tpr-Chr6 15455563 15456999 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1434 30 292 PP2C-type Phosphatase Gene Family AT5G06750 51.673 1.63e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1434 K01102 - sspl:121801210 275.018