Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1418 ATGGGATTGGCTGCAGAGTCACAGTTTCATGTTTTGGCTGTTGATGATAGCATCATAGATAGGAAACTTATTGAGAGGCTTCTCAAAACCTCTTCATATCAAGTTACAACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTTTGGGTCTATGTGAAAATGATGAGACCAACCCAAATACACCATCTGTCTTTCCTAATAATCATCAGGAAGTGGAAGTAAATCTTGTTATAACAGATTACTGTATGCCTGGCATGACAGGCTATGATTTGCTTAAGAAAATCAAGGAATCATCATCATTGAAAAACATACCAGTGGTTATTATGTCATCCGAGAATGTGCCTTCAAGAATCAATAGATGTTTGGAGGAAGGAGCAGAGGAATTTTTCTTGAAACCTGTAAGACTATCAGATTTGAGTAGACTTAAACCTCACATGAAGAAAACCAAATTGAAAGATCAAAAGCAAGAAACAGAACAAAAATTTGAAAACTCAGAAATTATTCAAAATGATCAAAAACAAACACCAAAATCTCAAATTCAACATTCAGATACAGAATCACAATCACAGACACAGTTACAAGCACATTCAACTATAGATCAACAACAACAATCACTACAACAAGGGAACAATAACAAGAGAAAGAATATGGAACAAGGTCTTTCATCTGACACAGATAGAACAAGACCAAGATACAGTGGCATAGCTACTGTTGTATGA 717 0.3543 MGLAAESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNTPSVFPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLKNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLSRLKPHMKKTKLKDQKQETEQKFENSEIIQNDQKQTPKSQIQHSDTESQSQTQLQAHSTIDQQQQSLQQGNNNKRKNMEQGLSSDTDRTRPRYSGIATVV* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1418 238 SUPERFAMILY CheY-like 8 141 IPR011006 -
Tpr6g1418 238 MobiDBLite consensus disorder prediction 145 238 - -
Tpr6g1418 238 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Tpr6g1418 238 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 234 IPR045279 GO:0009736
Tpr6g1418 238 Gene3D - 10 228 - -
Tpr6g1418 238 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 4 234 - -
Tpr6g1418 238 CDD REC_typeA_ARR 11 141 - -
Tpr6g1418 238 Coils Coil 147 167 - -
Tpr6g1418 238 MobiDBLite consensus disorder prediction 145 165 - -
Tpr6g1418 238 MobiDBLite consensus disorder prediction 166 217 - -
Tpr6g1418 238 SMART REC_2 9 142 IPR001789 GO:0000160
Tpr6g1418 238 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1418 Tpr-Chr6 15291418 15293833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1418 1 238 Response Regulator Gene Family AT3G57040 63.071 4.40e-98 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr6g1418 Response_reg 7e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1418 K14492 - gmx:100814494 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1418 6 15291418 15293833 Tpr6g1418 6 15291418 15293833 ECH