Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1409 ATGGCGGGCAAACGAGAGCTTGTGCTAGGTATCTGTGCCCCGGGAATTGTTGAGGTTCCGCCTGATAAACCTCCATCTAGACCTGTTGCATATGAGATTGATACATCAGATCATTTTTACACTGAAATGGCAACCCCTGACCGAGATGAGTTGATTAGATGGGCTCGGGAGATTGCCTTAAAGCTAAAGTTTGCAATTGTAATTGGCAAATCCGACAACGGCAGCGATAAGAGGAAGCAATATTTCAGGTTGGATTGCGAGCGGGGAGGCCGGTACGTGTCAACAAATAAGAAGCTAAAATCTGATCAAACCGGCACGAGGAAATGCGGCTGTCCATTTCGACTCCGTGGTTATTGTCATGCCGATAAAACATGGCATTTGACCGTTGTAAATGGCAAACATAACCACGAGTTGGACAAGGCAGTTGAAGGCCATCTCATTGTCGGTCGTCTCAAACCGGAAGAAAGGCAATGTATGGAGGAAATGTCAAGGAATTTGGTTCCGCCTAAGAATATAATGTCCACATTGAAAGATAGGGATCCAAACAACAAGACAACGGCAAAGCAACTCTACAATTTAAGTCATCGATTAAAACTTAAAATGAGGGCATCAATGACTGAAATGCAACACCTCTCCAAAAGACTTGTCGAGACCGGGTATTTTTTCAAACATAGGACGGTTGTTGCAGACGGATCCGAACACGTTCAAGACATTTTCTTTGCACATCCTAAATCTATAAGTTTGTTCAATTCTTTTCCTACTGTGCTTTTGATGGATTCGACATACAAAACAAACAAATACAAAATGCCGTTATTTGAGATTGTCGGATTCACATCAACTGGGAGATCTTTCAATGTTGGATTTGCTTGGCTTACCAATGAAAGAGAAGACAACTTCACTTGGGCTCTAGAGCAGTGTGTCAGTCTCTTAAGGAATGAGGATGTTAGACCGAAGGTGATTGTCACCGATAGGGATTTGGCTCTGATGAATGCAGTTTCCGAGGTATTTCCAACATCGGCTGCAATGGTTTGTCGTTTCCATGTAAAAAAGAACGTGAGCTCTAAGATGAAGGAAATTGTGAAAATCAAGAATGGAGAGAATGAGAAGCAGACTGATGTGTGGGATCAAATCACCGATGCTTTTAATGATGTGTTAGAGTCGCCAACGGAAAAAGAATATGCTGACAATGTTATGGTGTTTAGGGAGCTCTGTGCGAGATGGCCAAAGTTTTTGCGTTATGTTGAAGAGACTGTCCTAGACACTGATAAAGAAAGGGTTGTCAATGCTTGGGTAGACCAACATATGCACATGGGGAATCACACCACGAATAGAGCTGAATCATGTCATGGTGTGTTGAAAGGTTACTTGAAGGACGGTAACGGTGACTTGGTGAAAGGATGGGAAGCGATAAATAAGATGTTGATAAGTCAGTTCACTGAAGTACAAGGTGAATTCGGTCGGAGTATGTCTGTTGCGGAACACAGATACGATGATGATCCTCTTTACGCATTCTTGTTTTATAAAATCTCAAGAAAGGCTATGGATCACATTTATGACGAAGCAAACAGGGTCGAAGAATGTGGTATGGATAGCAAAAAGTGTGGCTGTGTTATGAGAAGGACATACGGGTTGCCATGTGCATGCTTGATTGCGAAGAAGATAAAAAATAACAAACCTATCCGACTGGATGAGATTCACCCTCAATGGAAGAAACTGTGTTTCGAAGATGAGCCGGCACCGGGCGACGTGGCTGACGATTATGATTGCTTGGCTGAGTGGAAAGCAATTCAGGAACGATTAAAAACAGCCGATGTTAGCGTGAAGAATGATATTAGGAATCAACTTCGTCTCATTGCATATCCAGAAACCACCTCTGTGAAACCTCCGCTTCAAAAGGCCAAAACAAAAGGTGCTAGAAAGAAAAAATCAGTTCGTGTCACAAGATCCACGAGCAGGGATAAGTCTCGGTGGGAGCATGTTGATGATCATATTGCAGCTACACAGGCATCTCAGTCGCAAGCAACAAAGTCAAAGCCGTCGACTTCACAAACAGTGCCTGAGGTGCCTAAAGAACTCGTCATCAGTACTTTGACTCCAGCACCTCCAGCACCTCCTGAAATTCCTTTTATCAACCATATGCCGAAGTTCATGCACCCATTTATTGAAGATATTATTGACGTTCAAGGTGACGGTTATTGTGGATACCGTGTGGTAGCTTTGCACCAAAAAGGAAATCAACAAGATTATGAGTTGATCAGACTGAACATGGAGAGGGAGCTGAGATTGCATAAGGAATCATATGTGGAGTTGTTCGATACTGAACGTTACAAGTATGTCACGGATGCACTTTTCCCACCACCGAGAAGGAGTAAACATGCTATTGCAACCAAGGACAAATGGTTTACTTTTCCGGATATGGGTTACGTTGTGGCTACTCATTTTCAGAGGGTTGTTGTTCAACTATCAAATATGGAAAAGTGTGGAGCATCTAGAACTTGTTTCCCATTGCGTGGCAAACCTCCATCAGACACGTCAGACTTGGATTCCAAGATTATTTGCATCGGCGCGCTCGCTGACCACTTTGTGTTAGTGCGATTGAAAGTAGGATGTCCGATACCTCCAACGGCTCATCAGTGGAAAAACTCTTGTTCCGAAGAAGCTGCAGATTGGGAGCCCATGTTTTTGGATAGAATGCAAAAGTTTGGTGAGCTGTTGACCATTGAAAGAGCAGGCGATGACTTAGTCACGATTGGAAAGGGTAGCAAAGACGATCCGTTGGAATTGTAG 2787 0.4331 MAGKRELVLGICAPGIVEVPPDKPPSRPVAYEIDTSDHFYTEMATPDRDELIRWAREIALKLKFAIVIGKSDNGSDKRKQYFRLDCERGGRYVSTNKKLKSDQTGTRKCGCPFRLRGYCHADKTWHLTVVNGKHNHELDKAVEGHLIVGRLKPEERQCMEEMSRNLVPPKNIMSTLKDRDPNNKTTAKQLYNLSHRLKLKMRASMTEMQHLSKRLVETGYFFKHRTVVADGSEHVQDIFFAHPKSISLFNSFPTVLLMDSTYKTNKYKMPLFEIVGFTSTGRSFNVGFAWLTNEREDNFTWALEQCVSLLRNEDVRPKVIVTDRDLALMNAVSEVFPTSAAMVCRFHVKKNVSSKMKEIVKIKNGENEKQTDVWDQITDAFNDVLESPTEKEYADNVMVFRELCARWPKFLRYVEETVLDTDKERVVNAWVDQHMHMGNHTTNRAESCHGVLKGYLKDGNGDLVKGWEAINKMLISQFTEVQGEFGRSMSVAEHRYDDDPLYAFLFYKISRKAMDHIYDEANRVEECGMDSKKCGCVMRRTYGLPCACLIAKKIKNNKPIRLDEIHPQWKKLCFEDEPAPGDVADDYDCLAEWKAIQERLKTADVSVKNDIRNQLRLIAYPETTSVKPPLQKAKTKGARKKKSVRVTRSTSRDKSRWEHVDDHIAATQASQSQATKSKPSTSQTVPEVPKELVISTLTPAPPAPPEIPFINHMPKFMHPFIEDIIDVQGDGYCGYRVVALHQKGNQQDYELIRLNMERELRLHKESYVELFDTERYKYVTDALFPPPRRSKHAIATKDKWFTFPDMGYVVATHFQRVVVQLSNMEKCGASRTCFPLRGKPPSDTSDLDSKIICIGALADHFVLVRLKVGCPIPPTAHQWKNSCSEEAADWEPMFLDRMQKFGELLTIERAGDDLVTIGKGSKDDPLEL* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1409 928 Pfam MULE transposase domain 255 351 IPR018289 -
Tpr6g1409 928 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 72 555 IPR031052 GO:0006355
Tpr6g1409 928 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 72 555 - -
Tpr6g1409 928 Pfam Transcription factor AFT 89 138 IPR014842 GO:0000981|GO:0036086
Tpr6g1409 928 MobiDBLite consensus disorder prediction 627 688 - -
Tpr6g1409 928 MobiDBLite consensus disorder prediction 648 663 - -
Tpr6g1409 928 MobiDBLite consensus disorder prediction 665 688 - -
Tpr6g1409 928 MobiDBLite consensus disorder prediction 633 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1409 Tpr-Chr6 15241594 15245271 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr6g1409 MULE 1.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1409 - - gmx:100800409 580.482