Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1394 ATGGCCACCAACGACAACAAAACTAAAGAAAAAGAGAACGAATTTTTCTTGGACGCTAATGAAGATGAAACTGATATCGAAGCTGTTAACTACGACAGTGACAATGATAATGATGATGAAGATTATGATCGCAATGAATCAGAACAACCTGAATCTTTCACTTCTCATCAATGGCCTCAAAGTTACAATGAGGCTATTGATCCTTTGACAATTGCTGCTGCACCAAATCTTGGATCAATATTCAAAGCACCAAGTGTTATTTATTCAAGCTTTGTAAATCTTGGATCAAAGAGTAACTTAGACTTACATGATGGAAAGACCCCTTTTTTATCTAATGCTCAAATTCCAGAAGGGGTTCCTAGACAATCAACATGGTGGGAGAAAGCTTCCATTCAAATGCATTTTCCTGAAGAATTGCCTATTGGTTATGGATGTACCTTCACTCAAACTATTTTTAATGGGATTAATGTGATGGCTGGAGTTGGGCTTCTATCTACACCTGATACTATAAAGCAAGCTGGGTGGGCGAGTATGCTGGTGATGGTTATTTTTGCAGTTATATGTTGTTATACAGCAGAGCTTATGAGACATTGCTTTCAAAACAGAGAAGGCATTGTTAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAAATATGGCCGAGTTATCATATCAATCATTTTGTACACTGAATTATATTCATATTGTGTGGAATATATCATCATGGAAGGCGATAACCTTTCTGGTCTGTTTCCTGGAACATCCTTGAATTGGGGAAGTTTAAATTTGGATGACAAGCACTTATTTTCAATTTTGACTGCACTGATTATTCTCCCTACCGTTTGGTTAAAGGATCTTCGTATAATCTCCTATCTCTCAGCTGGAGGGGTTATTGCGACAACTTTGATTGGTATGTGTGTGTTTGTTGTTGGGACAAGAAATGATGTTGGATTCCATCAAACTGGTCCATTTGTGAAATGGAGCGGCATTCCATTTGCTTTTGGTATCTATGGATTTTGCTTTGCAGGACATTCGGTTTTTCCCAATATTTATCAATCTATGGCTAACAAAAAAGAATTTTCCAAGGCAATGATCATATGTTTTATTTTGCCCATGTTGTTATACGGAAGCGTCGGAATCGCAGGGTTTCTCATGTTTGGTGAAGGGACTTTATCTCAGATAACATTGAATCTACCACGAGATGCATTTGCTACCAAATTCTCCATGTGGACTATAGCAATTCTCCCGCTAACGAAATATGCTTTGATGATGAACCCGCTCGCAAGAAGTGTAGAGGAATTGTTGCCTAATCACATTGCAAGAACTAATTGGTGTTTCATTCTTATTAGAACAGCACTGGTTATATCTACAGTTGTTGCTGCTTTTCTGATTCCATTTTTCGGGCTAGTGATGGCTTTAATCGGTTCTCTCCTCAGTGTACTTGTGGCAGTGGTATTGCCATCTTTATGTTTTCTGAAAATTGTGGGGAAAAAGGCAACAAGTACACAGGTTACTCTGAGTGTGGTAATTGCTGCATGGGGAATAGTATGTGCTTCACTTGGAACATATTCATCACTATTAAAGATTGTGCAGGTGCAGATGAGTGACTGA 1611 0.3849 MATNDNKTKEKENEFFLDANEDETDIEAVNYDSDNDNDDEDYDRNESEQPESFTSHQWPQSYNEAIDPLTIAAAPNLGSIFKAPSVIYSSFVNLGSKSNLDLHDGKTPFLSNAQIPEGVPRQSTWWEKASIQMHFPEELPIGYGCTFTQTIFNGINVMAGVGLLSTPDTIKQAGWASMLVMVIFAVICCYTAELMRHCFQNREGIVSYPDIGEAAFGKYGRVIISIILYTELYSYCVEYIIMEGDNLSGLFPGTSLNWGSLNLDDKHLFSILTALIILPTVWLKDLRIISYLSAGGVIATTLIGMCVFVVGTRNDVGFHQTGPFVKWSGIPFAFGIYGFCFAGHSVFPNIYQSMANKKEFSKAMIICFILPMLLYGSVGIAGFLMFGEGTLSQITLNLPRDAFATKFSMWTIAILPLTKYALMMNPLARSVEELLPNHIARTNWCFILIRTALVISTVVAAFLIPFFGLVMALIGSLLSVLVAVVLPSLCFLKIVGKKATSTQVTLSVVIAAWGIVCASLGTYSSLLKIVQVQMSD* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1394 536 MobiDBLite consensus disorder prediction 17 46 - -
Tpr6g1394 536 PANTHER AMINO ACID TRANSPORTER AVT1A 30 531 - -
Tpr6g1394 536 Gene3D Amino acid/polyamine transporter I 144 532 - -
Tpr6g1394 536 MobiDBLite consensus disorder prediction 1 16 - -
Tpr6g1394 536 MobiDBLite consensus disorder prediction 1 59 - -
Tpr6g1394 536 PANTHER OS05G0424000 PROTEIN-RELATED 30 531 - -
Tpr6g1394 536 Pfam Transmembrane amino acid transporter protein 146 522 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1394 Tpr-Chr6 14985433 14992040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1394 4 468 Amino Acid or Auxin Permease AAAP Family AT2G41190 58.403 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1394 K15015 - gmx:100790344 719.153