Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1390 ATGGGTAGTAGACGTAGAACTGCTGAGGACACTAACAAGGTTGTCAACGGGATGCCAAGCTACGCTCCTCCATTGCCACCTTCTAATTCCATGGGTATGGAAGGAAATATTCATCCTTCTCGACTTTCTGATTTTGGAGCCATCGAACAATCTCTTGGATTTCGCATTGAAGATGCCATGAATCTTAGCAGAAATCCAGTGTTTAATCAAATGAAATCAAATAGCCAAGCTCTAGGTGCTGATATTCAATTTGGTGCTTTAAACAAGACATTGCAATTGCAAAAAGAGTCACAGTCAAATTTGGCCTCAACATCTGGTGGCCATCGTGAGAACTGGGGAGAGTCCAACATGGCTGATGGAAGTGCTGATACTTCAACCGATGACACAGAAGACAAAAATCAAATGCCTGAAAGGGGAGAATCTAGTGAAAGATCGAAAGATAAATCAGATCAAAAGACGTTGAGAAGGCTAGCTCAAAATCGTGAGGCTGCCAGAAAAAGCCGACTGAGGAAAAAGGCATACGTGCAACAATTAGAGAGCAGTAGACTGAAATTGACCCAACTGGAGCAAGAGCTACAGCGAGCACGCCAGCAGGGAATATTCATTTCAAGCACCGGAGAGCAGACTCATTCAATGAGTGGAAATGGCGCAATGGCATTTGATGCTGAGTATGCACGATGGTTAGAAGAGCACAATAGGCAAACCAATGAGCTAAGGGCTGCAATAAATTCTCATGCTGGGGATATTGAACTGCGTACCATTGTGGACAATTTCATGACTCAATTTGAAGATATTTACAGGCTGAAAGGTGTTGCAGCTAAAGCTGATGTTTTCCACATTCTATCTGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTCCGCTCATCCGAACTTCTTAAGCTTCTAGTAAGTCATTTGGAGCCTTTAACTGAGCAACAATTGATGGGAATCTACAACTTGCAACAGTCATCCCAACAAGCTGAAGATGCTCTCTCCCAAGGAATGGATGCATTGCAGCAATCACTTTCTGAGACATTAGCTAATGGTTCACCCAACCCATCAGGTGCTTCTGGAAATGTGGCAAACTACATGGGCCAAATGGCTATGGCCATGGGAAAACTTGGTACTCTTGAGGGGTTTCTTCGCCAGGCTGATAACCTGCGGCAGCAAACATTGCAACAAATGCTTCGGATATTAACAACCAGGCAATCAGCTCGAGCTCTTCTCGCAATAAGTGATTATTTCTCCCGGCTGCGAGCACTGAGTTCTCTATGGCTTGCACGGCCAAGGGATTGA 1314 0.4467 MGSRRRTAEDTNKVVNGMPSYAPPLPPSNSMGMEGNIHPSRLSDFGAIEQSLGFRIEDAMNLSRNPVFNQMKSNSQALGADIQFGALNKTLQLQKESQSNLASTSGGHRENWGESNMADGSADTSTDDTEDKNQMPERGESSERSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGEQTHSMSGNGAMAFDAEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFMTQFEDIYRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVSHLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSGASGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRD* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1390 437 ProSiteProfiles DOG1 domain profile. 217 434 IPR025422 GO:0006351|GO:0043565
Tpr6g1390 437 SMART brlzneu 148 211 IPR004827 GO:0003700|GO:0006355
Tpr6g1390 437 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 150 194 IPR004827 GO:0003700|GO:0006355
Tpr6g1390 437 MobiDBLite consensus disorder prediction 125 154 - -
Tpr6g1390 437 Pfam Seed dormancy control 235 310 IPR025422 GO:0006351|GO:0043565
Tpr6g1390 437 Pfam Basic region leucine zipper 148 194 IPR004827 GO:0003700|GO:0006355
Tpr6g1390 437 PANTHER TRANSCRIPTION FACTOR TGA9 56 437 - -
Tpr6g1390 437 MobiDBLite consensus disorder prediction 95 123 - -
Tpr6g1390 437 Coils Coil 171 198 - -
Tpr6g1390 437 SUPERFAMILY Leucine zipper domain 152 195 IPR046347 GO:0003700|GO:0006355
Tpr6g1390 437 MobiDBLite consensus disorder prediction 95 154 - -
Tpr6g1390 437 CDD bZIP_HBP1b-like 152 204 - -
Tpr6g1390 437 Gene3D - 151 203 - -
Tpr6g1390 437 MobiDBLite consensus disorder prediction 1 22 - -
Tpr6g1390 437 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 155 170 IPR004827 GO:0003700|GO:0006355
Tpr6g1390 437 PANTHER TGACG-SEQUENCE-SPECIFIC DNA-BINDING PROTEIN TGA-2.1 56 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1390 Tpr-Chr6 14941134 14946915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1390 117 437 bZIP Transcription Factor Family AT3G12250 73.414 2.31e-169 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr6g1390 DOG1 2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1390 K14431 - gmx:778136 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1390 6 14941134 14946915 Tpr6g1390 6 14941134 14946915 ECH