Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1370 ATGAGAGGATCCATTATCATGTACTATCACACTGTATCTCTTCTTCCTTTCTTGAAGATGTTCTTCATCGTACTCTTACTAATAATTTCAACATCTACCAATAATATTAATGCAGAATACGATGAAGCAAATTACATGTCCGATTTATTACAATCACTATCCCATACTCCCTCTAGCTGGTCTAACAAAATTCACCACTGCAAATGGAAAGGCATAACTTGCAACTCAACTACTCAAGCTGTTACCTCCATCATCCTCCCATCAAATTCACTCACCGGCACACTCCCTTCGAATATCGAGACTCTAACTAATCTCACTCACATCGATCTTCACAACAACTCACTCAATGGTCCTTTACCCGATTTTACTAACCTTGCCTTGCTCCAAACTATTTCCCTTGGTCACAATAACTTCACCTCTCTCCCAGAAGATAACTTACGATACTTCACTGAACTAAGAACTCTCAACCTTAGCAATAACTTGAACCTCTCCCAATGGGGATTTCCTATGAATTATTTCGATTACTCCTCCCCTTTGTACTCCATCGATTTCGAAGCTACGAATATGATAGGCTCATTTTCAGATCCTGATATATTTGATTCGTTTCCAAATTTGCATACTTTTATTATTTCTCACAACAAAATGGAAGGATTTCTACCCCCGTCTCTCGGGAAATCTGCAATAAGGAATTTACGACTTAACAATCAGAGAGGTCACGCGTTTTCGGGCACAATTGACATTATATCAAAAATGAGAAATTTGTCTCAAGCATGGCTTCACCATAACAACTTCAAGGGTCATATTCCTAACATGTCCAATTGTATTAATTTGTTTGATTTGCAGCTTCAGTCAAATAGCTTAGATGGTTTGGTTCCACCTTCATTGTTTTCTCTTACTAGCTTGAACATCATCTCTTTGGAAGAAAATAGGCTTCAAGGACCATTACCTGAGTTTCGCAAGGGTGTTAACGCAACTTTTGAACACAATAACTTTTGTCGAAGCGATGTTGGACCTTGTGATTCCCAGATTATGATTTTATATGATATTATCGATGCTCTTGGGTCTCCTGTATTTTTGGCAACTCAAGGAAATAATGCTTGTACCGGAGGTACATGGATCAAGTTAATGCCCGATCGAGTACAGATTAAGTGTGAAAGAGGGAAAATTGTTAGTTTTAAGATCTGCTATGTTAATGGTATACATGATAGTGGAAGTGGAACCATCTCTCCTAAATTTTCCAATTTAACAAGTTTAGTGAACTTGACTCTTGTTGGAAATAATTTGACCGGTCCAATACCACACAGTCTTACAACTTTGCATCATCTTCAGCTTCTTGATGTTTCCGATAATAATCTATCAGGAACAATTCCCAAATTTCCATATGAGATTAAGTTAAATATCACAGGCAATAATTTGCTAAGGCAAAATATGTCTAGACAAGGTGGAGGTGAAAATGCAACTACTCCAGGTAATGATCAAACCGGAGGTTCATCTAAAGCAGCAAACCTTAGACCTTTTTGGATTGCAGGGGCGTTTGGAGTTGGATTTGTCGTACTTATTGTGTTGATTATTTGTAAACGTAAGAGGTATCATATTTTAGTAAAAAGGTGGGTCGTCAAGAAAACAATAAAATCTATTGACAACAATGTGGAGGATTTCATAAAAAGTTATAACTTGTCAGTGCCAATTAAGCAGTATAGATATTCAGAAGTGAAAAGAATGACAAACTCATTCCGAGACAAATTAGGTCAAGGAGGATACGGTGTTGTTTACAAAGCAAGTTTACTTGATGGACGTCAAGTGGCGGTGAAAGTGATAAACGAGTCAAAGGGAAATGGAGAAGAATTCATAAATGAAGTAGATAGCATTAGTAGAACGTCACATGTGAACATCGTTTCACTTTTGGGTTTTTGTTATGAGAACAAAAGAGCATTAATATATGAATACATGTCAAAGGGATCATTGGATAAGTTTATCCTTAAAGGTGGATTTCCTTATGCTATTTGTAGTTTGGATTGGAACACGATGTACAAAATTGCAATTGGCATTGCTCGGGGACTAGAATACTTGCATCAAGGATGTATTTCAAGGATTTTGCATCTTGATATCAAACCCCAAAACATTCTTTTGGATGAAGATTTTTGTCCAAAAATCTCTGATTTTGGACTAGCTAAAATATGCGAAAGGAATAATAGTATTGTTTCGATGCTTGGCACAAGAGGAACCGTAGGATATATAGCACCAGAAGTATTTAACCGAATGTTTGGTGGAGTTTCTCACAAGTCTGATGTATATAGTTATGGTATGTTAATTCTAGAAATGATTGGAGGAAGAAAGAATTATGACACTGGAGGTTCATGTACATCTGAAATGTACTTTCCAGATTGGATTTATAAGGATCTTGAACAAGGTAACAACCTTGAGAGTGGTTTGGCAAATTCTGAGGAAGAAAATGATATGGTTAGAAAGATAACTATGGTGAGTCTATGGTGCATTCAAACAAATCCATCAGATAGACCATCAATGAGTAGAGTGATAGAAATGCTGCAAGGACCACTTCTGTCAATGTCATATCCTCCAAAGCCTTTCTTATATTCTCCTGAAATGCCACCATTACAAACTTCACATGTGTCTTCTAGCAATTTGCAAGAGACAAATTCAGAAAGTCAGTAG 2673 0.3685 MRGSIIMYYHTVSLLPFLKMFFIVLLLIISTSTNNINAEYDEANYMSDLLQSLSHTPSSWSNKIHHCKWKGITCNSTTQAVTSIILPSNSLTGTLPSNIETLTNLTHIDLHNNSLNGPLPDFTNLALLQTISLGHNNFTSLPEDNLRYFTELRTLNLSNNLNLSQWGFPMNYFDYSSPLYSIDFEATNMIGSFSDPDIFDSFPNLHTFIISHNKMEGFLPPSLGKSAIRNLRLNNQRGHAFSGTIDIISKMRNLSQAWLHHNNFKGHIPNMSNCINLFDLQLQSNSLDGLVPPSLFSLTSLNIISLEENRLQGPLPEFRKGVNATFEHNNFCRSDVGPCDSQIMILYDIIDALGSPVFLATQGNNACTGGTWIKLMPDRVQIKCERGKIVSFKICYVNGIHDSGSGTISPKFSNLTSLVNLTLVGNNLTGPIPHSLTTLHHLQLLDVSDNNLSGTIPKFPYEIKLNITGNNLLRQNMSRQGGGENATTPGNDQTGGSSKAANLRPFWIAGAFGVGFVVLIVLIICKRKRYHILVKRWVVKKTIKSIDNNVEDFIKSYNLSVPIKQYRYSEVKRMTNSFRDKLGQGGYGVVYKASLLDGRQVAVKVINESKGNGEEFINEVDSISRTSHVNIVSLLGFCYENKRALIYEYMSKGSLDKFILKGGFPYAICSLDWNTMYKIAIGIARGLEYLHQGCISRILHLDIKPQNILLDEDFCPKISDFGLAKICERNNSIVSMLGTRGTVGYIAPEVFNRMFGGVSHKSDVYSYGMLILEMIGGRKNYDTGGSCTSEMYFPDWIYKDLEQGNNLESGLANSEEENDMVRKITMVSLWCIQTNPSDRPSMSRVIEMLQGPLLSMSYPPKPFLYSPEMPPLQTSHVSSSNLQETNSESQ* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1370 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Tpr6g1370 890 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Tpr6g1370 890 PANTHER TYROSINE KINASE FAMILY PROTEIN 28 887 - -
Tpr6g1370 890 MobiDBLite consensus disorder prediction 869 890 - -
Tpr6g1370 890 PANTHER RUST RESISTANCE KINASE LR10-RELATED 28 887 IPR045874 GO:0004672
Tpr6g1370 890 MobiDBLite consensus disorder prediction 871 890 - -
Tpr6g1370 890 Gene3D Ribonuclease Inhibitor 41 339 IPR032675 -
Tpr6g1370 890 SUPERFAMILY L domain-like 51 461 - -
Tpr6g1370 890 SMART serkin_6 576 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1370 890 Gene3D Transferase(Phosphotransferase) domain 1 650 855 - -
Tpr6g1370 890 SUPERFAMILY Protein kinase-like (PK-like) 552 849 IPR011009 -
Tpr6g1370 890 ProSiteProfiles Protein kinase domain profile. 576 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1370 890 Gene3D Phosphorylase Kinase; domain 1 550 649 - -
Tpr6g1370 890 Pfam Protein kinase domain 580 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1370 890 Pfam Leucine rich repeat N-terminal domain 53 75 IPR013210 -
Tpr6g1370 890 Gene3D Ribonuclease Inhibitor 357 477 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1370 Tpr-Chr6 14676985 14680343 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1370 502 889 Receptor kinase-like Gene Family AT4G18250 50.000 2.16e-124 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr6g1370 Pkinase 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1370 - - cam:101489592 1053.12