Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1369 ATGGTGGAGAGAAGAAGAAAACCTCTGGTTCTGTGTTCAACGAAAAATATCATCAATTCGGTATTGAAGAAATCTTCAACTAATGAATTCCCTAACTTGCATTTACCGGTTGGAATTCTCCGATTTTCCAACAATTTGCCTTCTTCTTTTCACGACGACGACTCTGCACTCATTGCTCTCTCCACTTCTCTTCTCAAAACACTTTCCATCACTTCTGGTTCTCCGGTTATGGTCAAGAATGCTGAAATGAACACACAAAGAATTGCAGTGGCTATTGCTCTAGACCCTCCTGGCAGTGACACCCCTACCCTTGATATAGATCACTCACCATCCTCTTCTTCTAGAATAATGCTTGTGTTTCCTTCCTGTGATTTCCCTTTAAGCTGCCCCTTGTTAAATGCTGAAATTGCGTATTTGTCTCCTCTTTTGGCCTTTAATCTTAACTTGCACATTTCATGTTTGAAATCTATTATTCGCAATGGTCAAGATGCTTTGTCGTCTTATTTCAAACCTCAATGCCAAGTGGGTGATGAAGATGCAGCTAAAAGCATTGAAGATTCTGTCATTAATATCGAGTTGGAGCCTCTGGCTGAACCTCCCAGATTTGCCTCCCTTCTGAGGGTTGCTTTTGTCAAGATACCAGAATGTGGCGTCCTTGATTCCATTAAACCAACTTCAGATGTTGAATCCAAAGAACGTCAAGAGATGATTGACTTGGCTTTGCAGAAGTACTTTGAAGTCGATAGATATTTGTCAAGTAGAGATATTTTCAGAATTAACATTAGTTGGAATTGTAATTCCACTATTTGCATTCCTTGTAACCACAAAATACAAAACAAAAGTGACAACTTTATCTGTTTTAAGGTCATTGCTATGGAACCATCAGATGAACCAGTTCTTCGTGTCAATAAAACCTTAACTGCTTTGGTGTTAGTAGGGAGTTCCCCATCTGCCCTTCCTCCGGATTTGCTAATTGCTGGACCAGAAGGGACTGTGCCTTTGCAAAGGGACACAGTGAAGACCTTGGCTTCAATACTAGCACCAACATTATGTCCAACTGCACTTTCTTCCAAGTTTAGAGTTTCAGTGTTATTGTATGGCTTGGCAGGTTGTGGGAAAAGGACTGTTGTTAGATATGTTGCTCGACGACTAGGCTTGCATGTGGTGGAATATAACTGTCATGATCTAATGGGCTCCGAGAGAACATCTGTTGCTCTCGCTCAAGTTTTCAAGACTGCTCAAAGATACTCGCCAACAATACTTCTTCTTCGTCATTTTGAGGTTTTCCAAGATTCACAATCACCCGAGGTTTCACAAAATGATCAAAGAGGCAATACATCTGAAGTTGCATCAGTCATTAGGAAATTCACTGAGCCAGTTGGCGAACATGGTGATAGTAACTCCTTGGTGAAATCAAACGGAGAATTTGTGGAGAAAACTTCTGAAAAGACAAGTGGGCACCAGGTCCTGTTGATTGCGGCTGCTGACAGTTTAGAGGGTCTACCTTCAACTATCAGACGCTGCTTTAGCCATGAAATAAGCATGGGGCCTTTAACAGAAGAGCAAAGGGCTGAAATGCTATTGCATTCACTTCAAAATGTTTATGGACTCCACTCTAATACTGATTTAGAGGGTTTTGTAAAAGAAATAGTTGGACAGACATCTGGTTTCATGCCCAGGGATATGTGTGCTTTAATTGCGGATGCTGGTGCCAGCTTATTTCCCAGGAGCAATGCCGAAGTAGACAAAGATGAACCTGAAGATACAGATAGTTCTCTTAGTTCCAAGGTGACGGAGGACAACAACCAGTCAAAAGTTTCAGCTCTGAAACCTGGGAAAGAAGACTTGGTGAATGCTTTGGAACGATCCAAGAAAAGAAATGCATCAGCATTGGGTACGCCAAAGGTTCCAAATGTAAAATGGGAAGATGTTGGTGGGCTTGAAGATGTCAAAAAATCAATCCTGGATACTGTTCAGTTGCCTCTCTTGCATAAAGATCTATTTGCATCCGGATTACGGAAGCGGTCTGGTGTTCTTTTGTATGGCCCCCCTGGAACTGGCAAAACTTTATTAGCAAAAGCTGTTGCTACAGAATGCTCCTTAAATTTTCTTAGTGTGAAAGGTCCTGAACTGATCAACATGTACATAGGAGAGTCTGAGAAGAATGTTCGAGACATTTTTCAGAAGGCCAGATCAGCACGTCCATGTGTCATATTCTTTGATGAGCTTGATTCTCTTGCACCAGCTCGGGGAGCTTCCGGAGATTCTGGAGGTGTTATGGACAGAGTTGTTTCACAGATGCTTGCAGAAATTGATGGCTTAAGTGATTCAACACAGGATCTATTTATTATAGGTGCAAGTAATAGACCGGATTTGATAGATCCGGCACTTCTTCGCCCTGGTCGTTTTGATAAATTGTTATATGTTGGAGTTAACTCTGATGCATCATACAGAGAGAGGGTACTGAAAGCTCTAACGCGAAAGTTCAAATTGCATGAAGATGTTTCACTTTACGACATTGCAAAAAAGTGTCCACCAAACTTCACCGGCGCAGACATGTATGCCTTGTGTGCAGATGCTTGGTTCCTCGCGGCAAAGCGCAAGGTTTTGAATGCAGATCCAGAGTCCTCCAACCCAGATAATGAAGCAGATTCTATTGTTGTTGAATACGACGATTTTTTCCAGGTCTTAGAAGAGCTTCAGCCTTCCCTCTCCACGGCTGAGCTTAAGAAGTATGAGCTTCTTAGAGATCAATTTGAAGGAACCTCTAAATGA 2775 0.4191 MVERRRKPLVLCSTKNIINSVLKKSSTNEFPNLHLPVGILRFSNNLPSSFHDDDSALIALSTSLLKTLSITSGSPVMVKNAEMNTQRIAVAIALDPPGSDTPTLDIDHSPSSSSRIMLVFPSCDFPLSCPLLNAEIAYLSPLLAFNLNLHISCLKSIIRNGQDALSSYFKPQCQVGDEDAAKSIEDSVINIELEPLAEPPRFASLLRVAFVKIPECGVLDSIKPTSDVESKERQEMIDLALQKYFEVDRYLSSRDIFRINISWNCNSTICIPCNHKIQNKSDNFICFKVIAMEPSDEPVLRVNKTLTALVLVGSSPSALPPDLLIAGPEGTVPLQRDTVKTLASILAPTLCPTALSSKFRVSVLLYGLAGCGKRTVVRYVARRLGLHVVEYNCHDLMGSERTSVALAQVFKTAQRYSPTILLLRHFEVFQDSQSPEVSQNDQRGNTSEVASVIRKFTEPVGEHGDSNSLVKSNGEFVEKTSEKTSGHQVLLIAAADSLEGLPSTIRRCFSHEISMGPLTEEQRAEMLLHSLQNVYGLHSNTDLEGFVKEIVGQTSGFMPRDMCALIADAGASLFPRSNAEVDKDEPEDTDSSLSSKVTEDNNQSKVSALKPGKEDLVNALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFASGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLHEDVSLYDIAKKCPPNFTGADMYALCADAWFLAAKRKVLNADPESSNPDNEADSIVVEYDDFFQVLEELQPSLSTAELKKYELLRDQFEGTSK* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1369 924 CDD AAA 354 423 - -
Tpr6g1369 924 Gene3D - 636 913 IPR027417 -
Tpr6g1369 924 MobiDBLite consensus disorder prediction 577 613 - -
Tpr6g1369 924 CDD AAA 662 810 - -
Tpr6g1369 924 ProSitePatterns AAA-protein family signature. 781 799 IPR003960 GO:0005524|GO:0016887
Tpr6g1369 924 Gene3D - 812 898 - -
Tpr6g1369 924 SMART AAA_5 674 814 IPR003593 -
Tpr6g1369 924 SMART AAA_5 359 519 IPR003593 -
Tpr6g1369 924 PANTHER PEROXISOME ASSEMBLY FACTOR 2 20 920 - -
Tpr6g1369 924 PANTHER AAA-FAMILY ATPASE 20 920 - -
Tpr6g1369 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 331 584 IPR027417 -
Tpr6g1369 924 Gene3D - 330 537 IPR027417 -
Tpr6g1369 924 MobiDBLite consensus disorder prediction 578 594 - -
Tpr6g1369 924 Pfam ATPase family associated with various cellular activities (AAA) 678 810 IPR003959 GO:0005524|GO:0016887
Tpr6g1369 924 Pfam ATPase family associated with various cellular activities (AAA) 363 514 IPR003959 GO:0005524|GO:0016887
Tpr6g1369 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 637 918 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1369 Tpr-Chr6 14654614 14661447 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1369 644 883 Calmodulin-binding Proteins AT3G56690 38.589 1.86e-41 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1369 K13339 - gmx:100820183 1445.25