Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1366 ATGGCATCTAGCTCAATGTCAGCATCTGGCTCATGGAGTGTTAAGGAAAATAAAGCCTTTGAAAGAGCTCTAGCTGTTTATGACAAAGATACTCCTGATCGTTGGTACAATGTAGCTCATGCTGTTGGTGGCAAAACTCCTGAGGAAGTTAAGAAACACTATGAACTTCTTGTTGAGGATATTAAACATATTGAGTCAGGGAAAGTTCCATTCCCAAATTACAAGAAAATTTCAGCTTCTCATGAAGAGAAAAGGATGAGGAACATGAACCTTCATTAA 279 0.3835 MASSSMSASGSWSVKENKAFERALAVYDKDTPDRWYNVAHAVGGKTPEEVKKHYELLVEDIKHIESGKVPFPNYKKISASHEEKRMRNMNLH* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1366 92 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 91 - -
Tpr6g1366 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 91 IPR044636 GO:0003700
Tpr6g1366 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Tpr6g1366 92 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Tpr6g1366 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Tpr6g1366 92 SUPERFAMILY Homeodomain-like 5 62 IPR009057 -
Tpr6g1366 92 Gene3D - 2 71 - -
Tpr6g1366 92 CDD SANT 16 58 IPR001005 -
Tpr6g1366 92 SMART sant 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1366 Tpr-Chr6 14623767 14624789 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr6g1366 Myb_DNA-binding 3.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1366 - - gmx:100818368 162.54