Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1362 ATGACTATAGGTTTTCGGTCATCTCCTTCTGCCAACCTTCCTACCCCATCGGAGGTTGTACGCAAAGTAGAGGCTAAGTATCCTGATTTGGTTTTCAAGCAACAGCTCACAGCCTATGTGGAGAAAATATATGGTATCTTGCGGGACAACTTGAAGAAAGAGTTGGCATCATTTATTTCGTTATGTATCCAGGCACCAAGAACATCTAAGGGAGTCTTAAGATCTGGCCGATCTTTTAGTAAAGATTCTCCCATGGGTCATTGGCAGAGTATTATTGAATCCCTCAACACTATTCTCTGTACTATGAAAGAGAACTTTGTGCCTCCTGTCCTTGTCCAAAAGATCTTCTCTCAAACATTTTCATATATTAACATTCAACTCTTCAACAGTCTTCTTCTGCGGCGTGATTGTTGTCCATTCAGCAATGGAGAATATGTGAAGGTTGATTTAGCAGAATTGGAGATGTGGTGCTGCCAAGCAAAGGAGGAGTATGCTGAGACATCTTGGGATTAG 513 0.4172 MTIGFRSSPSANLPTPSEVVRKVEAKYPDLVFKQQLTAYVEKIYGILRDNLKKELASFISLCIQAPRTSKGVLRSGRSFSKDSPMGHWQSIIESLNTILCTMKENFVPPVLVQKIFSQTFSYINIQLFNSLLLRRDCCPFSNGEYVKVDLAELEMWCCQAKEEYAETSWD* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1362 170 PANTHER MYOSIN-6 1 170 - -
Tpr6g1362 170 Pfam DIL domain 114 162 IPR002710 -
Tpr6g1362 170 ProSiteProfiles Dilute domain profile. 17 170 IPR002710 -
Tpr6g1362 170 PANTHER MYOSIN 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1362 Tpr-Chr6 14509847 14515572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1362 1 170 Myosins gene family AT5G43900 66.102 4.68e-76 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1362 K10357 - gmx:100791070 309.301