Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1355 ATGAGTATGAGTTTTGTAAATATACCTGCTTTAAATGGAAGAGAGAAAAATGGATGGAAGAGAGAGGGGTGGAAGAAAGAGCTTCTTGGACATGGCCATGGTGAAGGTGGTTGGCGTGAAGATGAATGGGTTGTTGTTGATACCTTTGTGTGTGAGAGAAAAGAAGATGTGAAAATTGATCCACTAAAAAGGTTGGCTAGTGATATTGTGAGACGGGTTGGCCGCATGAAGGTTCTTATTGTTCTTGATGATGTCAAGAATAAAAATCAGGTAAAGATGTTATTTGGAACCCTTGATTGGTTTCGATCAGATAGTAGAATAATTATAACAACCAAAGATAAGCAAGTACTTATTGCTAATGGAGTTTATGATCATGATCTATATGAGGTTGGGGTATTGAGTTTTAATCAAGCACTTGAGCTTTTCTATTTAAATGCCTTCAAACAGATTAATCAACCTGAAAAAGAGAAGTACTATAAGCTATCAAAGAGGTTTGTCGATTAG 504 0.3631 MSMSFVNIPALNGREKNGWKREGWKKELLGHGHGEGGWREDEWVVVDTFVCERKEDVKIDPLKRLASDIVRRVGRMKVLIVLDDVKNKNQVKMLFGTLDWFRSDSRIIITTKDKQVLIANGVYDHDLYEVGVLSFNQALELFYLNAFKQINQPEKEKYYKLSKRFVD* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1355 167 Gene3D - 45 121 IPR027417 -
Tpr6g1355 167 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 53 151 - -
Tpr6g1355 167 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 53 151 IPR044974 GO:0006952
Tpr6g1355 167 Pfam NB-ARC domain 51 154 IPR002182 GO:0043531
Tpr6g1355 167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 165 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1355 Tpr-Chr6 14374041 14374544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1355 72 146 WRKY Transcription Factor Family AT5G45050 44.000 1.30e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1355 - - mtr:MTR_4g014120 127.872