Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1347 ATGGCTTCCTTCAGTTCTTCTTCCACAAATCAGGTTTTTGAATCCATATCTAACAATGATAAGAATCCAAGCTGGATCTATGATGTGTTTTTGAGTTTCTGTGACGAAGACACTGCCGATTCTTTTGCATCATATCTTTATACTGCTCTTACAGCGGCCGAAATTGTTGTTTTCAGGGACGACAGCAAGCTTAGAAATCAAGATCAGATAATAACTTCAACACATTCAGTTCTACATGCAATTGAAGGTTCTAGACTTTCTATTATTGTTTTCTCAAGAAATTATGCTGATTCAACATGTTGTTTACAAGAGTTGGAGAAAATAATGGAGTGCAGCAGAACAATAGACCAGATGGTTATCCCTGTGTTCTACGGCGTTAGTCTCTTTGATGTACATCACCAGGGAGGTATGTTTGGAGAAGCTTTTAAAGATCTTGCACAAAGGATCTCCAAGAATGACAAATCGAGTGAAGGTAGCAACATTTTAGGATTTGTGGTGGATTCCAGGAATGAAAGTGAGGATATCAGGAAAGTAGTAGACCATGTTACTGATTTATTAGACAGGACAGACTTATTTGTCCCGGGCCATCCAGTGGGATTAGAATCTCGGGTACAAGATGTTATTCAACTACTGAACAGGCAACAATCAAAAGATACTCTACTGCTTGGTATATGGGGCATGGGAGGGATTGGCAAAACAACCATTGCTAAAGCCACTTATAATAAAATCCGTCACGATTTTGAGGCAAAGAGCTTCCTAAATGTGAGGGAAGTTTGGGAACAAGATAATGGTGAAGTTTATCTACAACGACGACTTCTTTCTGATATCTACAAAACAGCAAAAGTAAATATAGATACAGTTGAATCAGGAAAAATAATATTACATGAAAGACTTTGCCAAAAGAAAATATTTCTTATGCTTGATAATGTGAATAAATTGGATCAATTGAATGCTCTGTGCGGAAGTCGCAAGTGGTTTGGTCAAGGAAGTATAATAATTATCACAACAAGAAATTTTGATTTACTTAGTAAGGTTAAGGTTGACTATGTGTATAGAATGAATGAAATGGACTGGAATGAATCTCTTGAGCTTTTTAGTTGGCATGCATTCCGACAATCAATTCCTATAGAAGGTTTCACCGACCTTTCTACAGATGTTGTTAAGTACTGTGGGGGATTGCCGCTAGCTCTTAAAGTCATTGGCTATTTGTTGTGTGGTCGAAATAAACAAGGGTGGAAGAGTGTATTGGAGAAGCTAAAACTCATTCCCAATAATGAAGTGTTAGGGTTGCTTAGAATAAGTTTTGATGATTTATGTGATGATATGAAGGAGATGTTCCTTGATATAGCTTTTTTCTGTATTGGGATGGACCAAGAAGATGTAACTAAAATATTGAAAGACTGGGGACATCATGTAGATACTGGAATAAGTGTCCTTGTACAACAAAGTCTTGTAACCGTTGATCCGATGAACAAGATTGGAATGCATAATATGCTGCAAGAAATGGGAAGAGGAATCATAAGGGGAAAACCAACGGGTGTGGCTAATGAAAGGATCTACGATGTGTTCTTGAGTTTCAGAGGGGATGACTGTCGTGCAAAACTCATTTCACATCTCTATACCTCCCTTCAAAATGCTGGAATTTATGTTTTTAGAGATGATAACGAGATTCAACGGGGAGATAAGATCTCACTCTCACTTTTGGAGGCAATTAGAAAGTATAGAATTTCTATTGTTGTTTTGTCTAGTAATTATGCTAATTCAAAATGGTGTTTGCAAGAGTTAGAGAACATCATGGAAGCTAGCAGAAGCGGGGGTCTGGTGGTTGTGCCAGTGTTCTATGAGGTAGATCCCTCAGAAGTACGACATCTAACAGGCATGTTTGGAGAAGCTTTTGAAAATTTCATATCAAGAATCTCAGTGGATAAAGATAGGAAGATGGATTGGGAAACAGCGCTCCTTGAAATCGGCGGCACAGCAGGGATTGTCATCATAAATTCCAGGAATGAAAGTGAAGATATCAAGAAAATAGTAGAAAGTGTTACCAAGTTACTAGACAAAACAGACTTATTTGTTGCGGACCATCCAGTGGGGGTAGAATCTCGTTCACAAGATGTTATTCAACTACTGAACAGCCATCGATCAAAAGATTCTCTACTGATTGGGATGTGGGGCATGGGAGGGATTGGCAAAACAACCATTGCTAAAGCTGCTTATAATAAAATCCGTCATGATTTTGAGGCAAAGAGCTTCCTCCTAAATGTCAGGGAAGTTTGGGAGCAAGATAATGGCAAGGTTTCTCTACAACAACGACTTCTTTCTGATATCTACAAAACAACAAAGATAAATATAGATACAGTTGAATCAGGGAAAGTGATATTACAAGAAAGCCTTCAACAGAGGAGGATATTTCTTGTGCTTGATGATGTGAATAAAGTAGACCAATTGAATGCCTTGTGCGGAAGTCGCAAATGGTTTGGTCAAGGAAGTGTAATAATTATCACAACAAGAGATTATGATTTACTCCATAGGCTTAAAGTTGACTATGTGTATATAATGAAAGAAATGGACGACAATGAGTCTCTTGAGCTTTTTAGTTGGCATGCATTCAAGCAACCGATTCCTGTAGAAGGTTTTGCTGACCTTTCAAGAGATGTTGTTAAGTACTCTGGTGGATTGCCACTAGCTCTTCAAGTCATTGGGTCCTTTTTGTTGACTAGGCGAAGAAAAAAAGAGTGGAAGAGTGTACTGGGGAAACTAATACTTATTCCCAATGATGAAGTGCTAAAGAAGCTCAGAATTAGTTTTGACGGTTTACGTGATGATGATATAAAAGAAATATTCCTTGATATTGCCTTTTTCTTTATTGGGATGGACCAGGAAGATGTAATTACAATATTGGACGACTGTGGGCATTATGCAGATATTGGAATAAGTGTCCTTGTACAACAAAGCCTTATAACTGTTGATCGGAAGAACAAGATTGGAATGCATGATTTGCTACGTGACATGGGAAGAGAGATTGTACGTAAGAAATCAACAGAGGGAGGCAAGGAGCCTAGTAGGTTATGGCATTACGAGGATGTTAAGTATGTGTTGTCAAAAGATACCAGAACCTTAGATGTTAAGGGACTGACTTTAAAGATGTCAAGAACAGACTCCACAACTCGTTTGGAAACTAAACTATTTCAGAAGATGGATAAACTTAAATTGCTTCAACTTGCTGGCATACAACTAAACGGAGATTACAAATATCTTTCAAAAGATCTTAGATGGCTTTGTTGGCATGGATTTCCTTTGAAATATACGCCTGCAGAGTTTCATCAAGAATGTTTAGTTGCTGTTGACTTAAAATATTCCAATCTGGAACGAGTGTGGAAGAAGTCCCAGTTTCTGAAGGAGCTGAAATTTCTTAACCTTAGTCATTCTCATAACTTGAGACAAACCCCAGACTTTTCAAATTTGCCAAATCTTGAAAAGTTAATACTCAAATATTGTCCAAGTTTGTCCTCAGTTTCTCCTACTATAGGACATCTCAAGAAAATTCTTTTAATAAATTTGAAAGACTGTACAGGCCTTTGTGAAATTCCAAGAAGCATCTATAAATTAGAATCGGTAAAAACTCTCATTGTGTCTGGATGTAAGAAAATTTGCAAGTTGGAAGAGGACATAGAACAAATGACATCGTTGACCACCCTGGTTGCAGATAATACTGCTATAACAAGAGTACCCTTTGCAGTAGTAAGATCAAAGAGTATTGGATATCTTTCACTGTGTGGATTCAAAGGATTTGCACGTATTGTGTTTCCTTCGATTATTCAGTCTTGGATGTCTCCAACAAATGGTATCTTGTCCTTTGTTCAAACATTTGCAGGCACATCATCTCTTGAATTTTCAGAGGAACAAACTGATAGTTTCTATGGTCTACCATGTATTTTTGAAGATCTTCAGAATCTTCAACGTCTTTGGTTGATATGCGAGTCAGAAGTTCAACTACATCAAACTCTAACAAGTATTCTGGATAACTTACATACCAAAAGTTGTGAGGAATTGGAAGCAATGCAAAACACGCCACAATCTGCAAATTTTGTGACTTCAGCATCTACTCGCCGTTACAGTCAAGTTCAAATATCAAGCTCACAAAATTCCTTGACTTCGCTTTTAATTCAAATGGGAATGAACTGCCATGTCACTAATACTCTTAGAGAAAACATTTTACAGAAAATGCCTCCCAATGGGTCTGGTTTCCTCCCCGGTGACAATTATCCTGATTGGCTAGCCTTCAATGATAGCAGTTCTTCTGTAACTTTTGAAGTACCTCAAGTGGATGAGCGAAGTTTGAAAACAATCATGTGCGTTGTCTATTCTTCTTCTCCAGATGATATAACATCAGAAGGCCTTAAAGTTTTGTTGGTGATAAATTACACAAAGAACACCATTCAGCTCTATAAGAGAGACGGATTATCAGCCACCTCTGACGAGGAGGAGTGGCAGAAAGTAGTATCCTGA 4509 0.3786 MASFSSSSTNQVFESISNNDKNPSWIYDVFLSFCDEDTADSFASYLYTALTAAEIVVFRDDSKLRNQDQIITSTHSVLHAIEGSRLSIIVFSRNYADSTCCLQELEKIMECSRTIDQMVIPVFYGVSLFDVHHQGGMFGEAFKDLAQRISKNDKSSEGSNILGFVVDSRNESEDIRKVVDHVTDLLDRTDLFVPGHPVGLESRVQDVIQLLNRQQSKDTLLLGIWGMGGIGKTTIAKATYNKIRHDFEAKSFLNVREVWEQDNGEVYLQRRLLSDIYKTAKVNIDTVESGKIILHERLCQKKIFLMLDNVNKLDQLNALCGSRKWFGQGSIIIITTRNFDLLSKVKVDYVYRMNEMDWNESLELFSWHAFRQSIPIEGFTDLSTDVVKYCGGLPLALKVIGYLLCGRNKQGWKSVLEKLKLIPNNEVLGLLRISFDDLCDDMKEMFLDIAFFCIGMDQEDVTKILKDWGHHVDTGISVLVQQSLVTVDPMNKIGMHNMLQEMGRGIIRGKPTGVANERIYDVFLSFRGDDCRAKLISHLYTSLQNAGIYVFRDDNEIQRGDKISLSLLEAIRKYRISIVVLSSNYANSKWCLQELENIMEASRSGGLVVVPVFYEVDPSEVRHLTGMFGEAFENFISRISVDKDRKMDWETALLEIGGTAGIVIINSRNESEDIKKIVESVTKLLDKTDLFVADHPVGVESRSQDVIQLLNSHRSKDSLLIGMWGMGGIGKTTIAKAAYNKIRHDFEAKSFLLNVREVWEQDNGKVSLQQRLLSDIYKTTKINIDTVESGKVILQESLQQRRIFLVLDDVNKVDQLNALCGSRKWFGQGSVIIITTRDYDLLHRLKVDYVYIMKEMDDNESLELFSWHAFKQPIPVEGFADLSRDVVKYSGGLPLALQVIGSFLLTRRRKKEWKSVLGKLILIPNDEVLKKLRISFDGLRDDDIKEIFLDIAFFFIGMDQEDVITILDDCGHYADIGISVLVQQSLITVDRKNKIGMHDLLRDMGREIVRKKSTEGGKEPSRLWHYEDVKYVLSKDTRTLDVKGLTLKMSRTDSTTRLETKLFQKMDKLKLLQLAGIQLNGDYKYLSKDLRWLCWHGFPLKYTPAEFHQECLVAVDLKYSNLERVWKKSQFLKELKFLNLSHSHNLRQTPDFSNLPNLEKLILKYCPSLSSVSPTIGHLKKILLINLKDCTGLCEIPRSIYKLESVKTLIVSGCKKICKLEEDIEQMTSLTTLVADNTAITRVPFAVVRSKSIGYLSLCGFKGFARIVFPSIIQSWMSPTNGILSFVQTFAGTSSLEFSEEQTDSFYGLPCIFEDLQNLQRLWLICESEVQLHQTLTSILDNLHTKSCEELEAMQNTPQSANFVTSASTRRYSQVQISSSQNSLTSLLIQMGMNCHVTNTLRENILQKMPPNGSGFLPGDNYPDWLAFNDSSSSVTFEVPQVDERSLKTIMCVVYSSSPDDITSEGLKVLLVINYTKNTIQLYKRDGLSATSDEEEWQKVVS* 1503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1347 1502 SUPERFAMILY L domain-like 997 1326 - -
Tpr6g1347 1502 Gene3D - 193 350 IPR027417 -
Tpr6g1347 1502 SUPERFAMILY Toll/Interleukin receptor TIR domain 516 635 IPR035897 -
Tpr6g1347 1502 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 145 IPR035897 -
Tpr6g1347 1502 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 528 1502 - -
Tpr6g1347 1502 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 35 513 - -
Tpr6g1347 1502 Pfam TIR domain 27 155 IPR000157 GO:0007165
Tpr6g1347 1502 Pfam TIR domain 520 684 IPR000157 GO:0007165
Tpr6g1347 1502 PRINTS Disease resistance protein signature 720 735 - -
Tpr6g1347 1502 PRINTS Disease resistance protein signature 797 811 - -
Tpr6g1347 1502 PRINTS Disease resistance protein signature 890 904 - -
Tpr6g1347 1502 PRINTS Disease resistance protein signature 1130 1146 - -
Tpr6g1347 1502 SMART till_3 26 185 IPR000157 GO:0007165
Tpr6g1347 1502 SMART till_3 519 659 IPR000157 GO:0007165
Tpr6g1347 1502 ProSiteProfiles TIR domain profile. 518 685 IPR000157 GO:0007165
Tpr6g1347 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 684 951 IPR027417 -
Tpr6g1347 1502 Gene3D - 691 853 IPR027417 -
Tpr6g1347 1502 Pfam NB-ARC domain 201 420 IPR002182 GO:0043531
Tpr6g1347 1502 Pfam NB-ARC domain 703 920 IPR002182 GO:0043531
Tpr6g1347 1502 SUPERFAMILY "Winged helix" DNA-binding domain 426 511 IPR036390 -
Tpr6g1347 1502 Gene3D - 356 439 IPR042197 -
Tpr6g1347 1502 Gene3D - 855 940 IPR042197 -
Tpr6g1347 1502 Gene3D Ribonuclease Inhibitor 1026 1408 IPR032675 -
Tpr6g1347 1502 Gene3D - 514 690 IPR035897 -
Tpr6g1347 1502 Gene3D - 21 192 IPR035897 -
Tpr6g1347 1502 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 35 513 IPR044974 GO:0006952
Tpr6g1347 1502 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 528 1502 IPR044974 GO:0006952
Tpr6g1347 1502 ProSiteProfiles TIR domain profile. 25 186 IPR000157 GO:0007165
Tpr6g1347 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 449 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1347 Tpr-Chr6 14248153 14256602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1347 27 508 WRKY Transcription Factor Family AT4G12020 27.066 2.06e-37 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1347 - - mtr:MTR_7g088950 2133.61