Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1341 ATGGGTTTCCGTTTACCTGCAGCTATTAGACGGGCATCATTAAGCAGTAGCCAAACATCATCTAAAGTATCAAATATCCCAAAGGGCTATCTTGCAGTGTACGTTGGAGAGGAAATGAAGCGGTTTGTTGTCCCCTTGTCATACTTGAACCAACCTTCATTTCAAGACTTGTTGAGTCAAGCAGAGGAAGAATTTGGATATGATCATCCAATGGGTGGCCTTACAATTCCTTGCAGAGAAGATGTTTTCTTGAATATCACTTCTCGCTTCAATGGACTATAA 282 0.4113 MGFRLPAAIRRASLSSSQTSSKVSNIPKGYLAVYVGEEMKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCREDVFLNITSRFNGL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1341 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 91 - -
Tpr6g1341 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
Tpr6g1341 93 Pfam Auxin responsive protein 11 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1341 Tpr-Chr6 14159323 14159902 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1341 15 83 Calmodulin-binding Proteins AT3G43120 47.826 1.29e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1341 K14488 - gmx:100787155 147.902