Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1340 ATGGGTTTCCGTTTACCTGCCATTAGACGTGCTTCTTCAAAAGCTGTGAATGTCCCAAAAGGATATCTTGCAGTCTATGTTGGAGAAAAAATGAAGCGGTTTGTGATCCCTATGTCTTACTTGAACCAACTGTCATTTCAAGACTTGCTGGGTCAAGTAGAGGAAGAATTTGGATACGATCATCCGATGGGTGGCCTCACAATTCCTTGCACAGAAGATGCTTTCTTGCATATCACTTCTCGCTTGAATGGACTATAA 258 0.4225 MGFRLPAIRRASSKAVNVPKGYLAVYVGEKMKRFVIPMSYLNQLSFQDLLGQVEEEFGYDHPMGGLTIPCTEDAFLHITSRLNGL* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1340 85 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 10 83 IPR003676 GO:0009733
Tpr6g1340 85 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 10 83 - -
Tpr6g1340 85 Pfam Auxin responsive protein 12 82 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1340 Tpr-Chr6 14156112 14156769 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1340 17 78 Calmodulin-binding Proteins AT3G43120 51.613 5.10e-18 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1340 K14488 - gmx:100806671 144.436