Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1339 ATGGGTTTTCGCTTACCTGGTATTAGACGATCATCATGTAGCAAACAAATGGAAGTGCCAAAAGGCTATCTTGCAGTGTATGTTGGAGAGAAAATGAAGAGGTTCTTGATTCCAGTATCATTCTTGAATGAGCCTTTATTTCAAGAATTGCTAAGCCAATCTGAAGAGGAATTCGGTTACAGTCATCCAATGGGTGGTCTTACAATTCCCTGCAATGAAGATGTCTTCTTACATACAGCTTCTCGCTTGAACAACTTGTAA 261 0.3946 MGFRLPGIRRSSCSKQMEVPKGYLAVYVGEKMKRFLIPVSFLNEPLFQELLSQSEEEFGYSHPMGGLTIPCNEDVFLHTASRLNNL* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1339 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 84 IPR003676 GO:0009733
Tpr6g1339 86 Pfam Auxin responsive protein 13 81 IPR003676 GO:0009733
Tpr6g1339 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 11 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1339 Tpr-Chr6 14155103 14155636 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1339 18 76 Calmodulin-binding Proteins AT3G43120 55.932 6.84e-19 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1339 - K14488 gmx:100500615 134.42