Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1331 ATGGCTGAATTGTTTGTCTTTGATGTTGCTGATTCACTGCTTGGGAAGCTTGCTTCATATGCTTACGAAGAAGCTTCTCGAGCCTATGGTGTGTATGAAGATCTACAAGAGTTCAAAGATACTTTGTCAATAGTTAGAGGTTTGTTGTTAGACGCAGAGGAGAAGAAGAACCAACAACATGCCATCCGTGACTGGCTAAGGCAGATTCAAAGCATCTGCTCCGATGCTGAAGATGTATTAGATGGATTTGAGTTACAAGACAAACGGAAGCAAGTTGTGGAAGCTTCTGGCAGCACAAGTATGAAGGTACGCCACTTCTTTTCATCCTCTAATCCATTCGCTTTCCGTTTTAAGATGGCACAACAAATCAAAGATATTAGGGAAAGATTGGATAAGGTAGCATCTAATGGGACCAAGTTTGGACTTACAACCATCAACGTTAGTCCAGGACTTGTTGTCCAAAGGAGAGAAATGACTTATCCCGATGTTGATGCTTCAAGTGTCATAGGAAGAGAGAGTGACAGGGAAGAAATTATCAAGCTGTTGATGCAACCACATCCTCAAGGTGATGGTGTTGGTGATAAAAGTATGTGTGTTATTCCCATTGTGGGAATTGGAGGGTTGGGGAAAACCACACTTGCAAAGTTGGTGTTCAATGACAAGAGGGTGGATTTCCATTTGAAGATGTGGGTGTGTGTCTCCAATGCTTTTGACATCAAGCAGATAATTATTAATATCATAAACTCTATTTCTGCTTCAGCCCCAACTCTTACTTTTTCTCACCAAGAAAACATTAACAACTTAGATATGGTGCAGCTTGTAAGTCGTCTGAGATCTAAACTTTCTGGTCAGAAGTTTTTACTCGTGTTAGATGACATGTGGATGGATGATCGTGCAAAATGGATTGAGTTGAAAGATTTGATAAAAGTTGGGGCACCGGGAAGCAAAGTTATGGTGACAACACGTAGCAATTCAATTGCTTCACTGATGGGCACTATTCCCTCGTATGTTTTACATGGTCTTTCTATGGATAATAGTTTGGCTTTGTTCGTTAAATCAGCATTTGAGGAAGGCGAAGAAGAAAAATTTCCTAATCTAGTGGAGATTGCAAACGAAATTGTGAAAAAATGTCTAGGAGTTCCACTAGCTGTGAAAACATTAGGAAGTTCTCTATATTCAAAATTTGATTTAACTAAGTGGGAATTCGTAAGAGATTCAGAAATATGGAATTTAGAACAAAAGCAAGATGATATTTTACCTGCACTAAAATTAAGCTATGATCAAATGCCATCCTATTTGAGACACTGTTTTGCTTATTTTTCCCTATATCCCAAAGGTTATAGCTTCGGTGTGAATAGTATGCTTAAAATTTGGATAGCCCTAGGATTAGTGGAATCCCGTAATGGAAGTGAAAATCTGGAGAATATTGCTAGAGAATATATAGATGAATTCCATTCAAGGTCATTTCTTCTAGATTACGCGGATCAAGGCCAGCTTTTCAGTTTCAAATTACATGATTTGGTGCATGATCTTGCATTGTATGTTGCAAAGTATGAGTGTGTTCTAGTACAGTCCCATACTCGAAATATACCCAACCAAGTGAGGCATGTGTCAATTGTTGAAAAGGATTCACTTGATCTTGCTCTGATTTTAACGTCCAAACAAGTAAGAACTATATTGTTTCCCATTCGTGGAATGGGTCTTGACAGTGCTTCTCTTTTGGAAACATGGGTATCAAGATACAAATTCTTACGGATTTTAGATTTAAGTGATTCTTCGATAGATATTATACCTGATTCAATTGCTAAATTAGAGCACCTGCGCACTCTCGATCTATCTAATAACAGCAAAATCAAAAGACTTCCCAATTCTATTTGCAGGCTCCAAAATTTGCAAGTCTTGTTACTTTCTGGATGTATGGAGCTTAAAACACTACCTAAAGGATTAGGGAACCTGGTCAGCCTTCGAAAACTGTCTATAACGACAAAACAATATGTTCTTTCACAAAATGAATTTGCAAGCTTCAACTATCTTCAAACTTTGGATTTTTATTGTTGTGAAAATTTGAAAATTTTGTTCGATGGGGCACACCAACTCACTTTCCTTGAAACATTGATTGTTCAATCATGTGGAAGCTTGGAGTCCTTACCTCTTTATTGTTTCCCTAAATTACAGACTTTGTACCTTAGAGACTGTAAGATGTTAGATATGTCGTTGAACAACGAAAATCCAATTCAAAAATTGAAGATGAAACATCTGTATCTTGGTGAATTTCCAAGGCTTCTGACATTGCCGAGATGGATCGTAGGTGCTGCAGACACGTTAGAGACCTTGTTAATTGATAACTTTCCTAATCTTAAGATGCTTCCTGAGTGTCTCACAACAATGACTCATCTTAAGATGCTTGGTATCCGTCTCTGTACTCAATTGTTAACTCTTCCAATTGACATTCATAGCCTCACTGCACTTGAAGAATTGCTCATATATGGTTGTCATGAATTGGGCATAAAATGTCAGCCTCAAATTGGTGAATACTGGTCCATGATTGCTCACATCAAGCACATATCCATTGATAACCACTTTGAAGGTTTTCATTACTTACAGGATAAGGTGTACAATATGATGAGGCTGGAGTGGAAAAGGAATATGTTGCTTGAAGGGAGACAGAAAATGAATTGTTTGATGCAGATGGAGAAGAAGAATGTAAACATGAAACTTTAG 2721 0.3789 MAELFVFDVADSLLGKLASYAYEEASRAYGVYEDLQEFKDTLSIVRGLLLDAEEKKNQQHAIRDWLRQIQSICSDAEDVLDGFELQDKRKQVVEASGSTSMKVRHFFSSSNPFAFRFKMAQQIKDIRERLDKVASNGTKFGLTTINVSPGLVVQRREMTYPDVDASSVIGRESDREEIIKLLMQPHPQGDGVGDKSMCVIPIVGIGGLGKTTLAKLVFNDKRVDFHLKMWVCVSNAFDIKQIIINIINSISASAPTLTFSHQENINNLDMVQLVSRLRSKLSGQKFLLVLDDMWMDDRAKWIELKDLIKVGAPGSKVMVTTRSNSIASLMGTIPSYVLHGLSMDNSLALFVKSAFEEGEEEKFPNLVEIANEIVKKCLGVPLAVKTLGSSLYSKFDLTKWEFVRDSEIWNLEQKQDDILPALKLSYDQMPSYLRHCFAYFSLYPKGYSFGVNSMLKIWIALGLVESRNGSENLENIAREYIDEFHSRSFLLDYADQGQLFSFKLHDLVHDLALYVAKYECVLVQSHTRNIPNQVRHVSIVEKDSLDLALILTSKQVRTILFPIRGMGLDSASLLETWVSRYKFLRILDLSDSSIDIIPDSIAKLEHLRTLDLSNNSKIKRLPNSICRLQNLQVLLLSGCMELKTLPKGLGNLVSLRKLSITTKQYVLSQNEFASFNYLQTLDFYCCENLKILFDGAHQLTFLETLIVQSCGSLESLPLYCFPKLQTLYLRDCKMLDMSLNNENPIQKLKMKHLYLGEFPRLLTLPRWIVGAADTLETLLIDNFPNLKMLPECLTTMTHLKMLGIRLCTQLLTLPIDIHSLTALEELLIYGCHELGIKCQPQIGEYWSMIAHIKHISIDNHFEGFHYLQDKVYNMMRLEWKRNMLLEGRQKMNCLMQMEKKNVNMKL* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1331 906 Gene3D - 425 514 IPR036388 -
Tpr6g1331 906 Pfam Leucine rich repeat 584 639 IPR001611 GO:0005515
Tpr6g1331 906 Gene3D - 155 333 IPR027417 -
Tpr6g1331 906 Gene3D - 10 124 - -
Tpr6g1331 906 Gene3D - 340 424 IPR042197 -
Tpr6g1331 906 SUPERFAMILY L domain-like 503 842 - -
Tpr6g1331 906 Gene3D Ribonuclease Inhibitor 523 904 IPR032675 -
Tpr6g1331 906 ProSiteProfiles Leucine-rich repeat profile. 606 628 IPR001611 GO:0005515
Tpr6g1331 906 Pfam NB-ARC domain 194 427 IPR002182 GO:0043531
Tpr6g1331 906 CDD RX-CC_like 2 135 IPR038005 -
Tpr6g1331 906 PRINTS Disease resistance protein signature 199 214 - -
Tpr6g1331 906 PRINTS Disease resistance protein signature 280 294 - -
Tpr6g1331 906 PRINTS Disease resistance protein signature 377 391 - -
Tpr6g1331 906 PRINTS Disease resistance protein signature 602 618 - -
Tpr6g1331 906 PANTHER DISEASE RESISTANCE PROTEIN RP 6 786 IPR044974 GO:0006952
Tpr6g1331 906 Pfam Rx N-terminal domain 11 98 IPR041118 -
Tpr6g1331 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 439 IPR027417 -
Tpr6g1331 906 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1331 Tpr-Chr6 14040553 14044126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1331 200 834 WRKY Transcription Factor Family AT5G45050 21.527 1.20e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1331 - - cam:101498365 1140.95