Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1329 ATGGGAAAAGCCGAAGAAGAACAACACCTGCCACGTGGCGTTACATCATCGGATCAACCGCAAAATGCGGAAACAGAGTGTCGGTGCAGTTATTCTCGGATTCGAAAACTGTTTGGTTTCAGATGCATTCTCGTTTTCCTCTTCTCTCTTGCTCTGTTCCTCTCTGCTTTGTTTTGGTTACCCCCTTTCATAGATCACAACAATTTGCACGATGATTCCAAATATAAAGGTTATGATATTGTTGCAAGCTTTATTGTTAATAAGCCAGTCACTGTGCTAGAAGATAACAAATTTCAGCTCGAGTCTGAAATTCTTGAAGAGATTGAAGCTCCTAAAGTGACCATCTTGTCTCTAGACCCGTTACCTCGGCCAAACAACACAAAAGTGGTATTTGCAGTCGATCCTGATGGTGAAAACTCAGAAACGCCGTCGCCTGCCATTAGTTTGATAAGATCATTATTTGGGTCCTTGGTAATACGCCAATCAGTTCTCCGGCTCACTTCATCCTTGTTCGGAGATCCCTATTTTTTTGAAGTGCTGAAATTTAAAGGAGGAATTACTATAATTCCACAACAGAAGGCATTTCCTCTGCAAACAGTGCAAACAAAATTCAACTTTTCTTTGAATTTTCCCATTTATCAAATACAATCAAATCTGAATGAGCTGACAAGTCAGCTAAAGTCAGGATTACGTCTGACATCCTATGAGAACTTGAATGTCATCTTATCAAACTCCGAAGGTTCAACAGTAGATGCTCCTACTACTATTCAATCATCTGTTCTATTTGCGGTTGGGATTCCTTCATCAAAACAGAGGCTAAAGCGATTGGCGCAAACCATCATGGGACGTCATAATCTTGGCTTGAATAACACTGAATTTGGCAAGGTTAAGCATGTCAGACTTTCATCCATCTTGCAGCACTCCCTTAATGGCAGTGATACTGCGAGATCACCTTCTCCTGCTCCTGTTCCCCATTCCCCGCACCATCACCACCATCACCATCACCACCATCACCACCACCATCATCATCACCATCACAATACTCGCCTAACTCCTGCAACTTCTCCCATACCTGCACCTGCACCTAAACCTGGGGAGGGTGCAACTCCACCTGAGGTTGGCTCTCCTGCTACTACAAAAAGTGCACCTGCACCACACAAAAGTTCTCAAGCTCAGCCTCCTGATTGTCCATTCGAGCGTAGAAAAAGGTCTAGACGTAGTGCTGGGAGACATACTTATCTAACACCTGCGGTTGCCCCTAGTATTGAACATCATCATCCTGTTCCTATTTCATCACCAAAACCACAGGTTGAACCCCCTACACATGCTTCTCATCCAGTACCTGCTTTCAGTCCTTTGCCAAATGTAGCTTTTGCTCATGCTGAGCCTCCACCTAAGCGGGAACCAGCTGCAGAACAACCGTCCACACAACCTCATGGGCTATCAATATCTTCATCTTCTGCAGGTTGTCTTAGAACTGTGAAATGGACATCTTTAATATTTCTTGTACTTGTGTTACATGTGTGA 1527 0.4375 MGKAEEEQHLPRGVTSSDQPQNAETECRCSYSRIRKLFGFRCILVFLFSLALFLSALFWLPPFIDHNNLHDDSKYKGYDIVASFIVNKPVTVLEDNKFQLESEILEEIEAPKVTILSLDPLPRPNNTKVVFAVDPDGENSETPSPAISLIRSLFGSLVIRQSVLRLTSSLFGDPYFFEVLKFKGGITIIPQQKAFPLQTVQTKFNFSLNFPIYQIQSNLNELTSQLKSGLRLTSYENLNVILSNSEGSTVDAPTTIQSSVLFAVGIPSSKQRLKRLAQTIMGRHNLGLNNTEFGKVKHVRLSSILQHSLNGSDTARSPSPAPVPHSPHHHHHHHHHHHHHHHHHHHNTRLTPATSPIPAPAPKPGEGATPPEVGSPATTKSAPAPHKSSQAQPPDCPFERRKRSRRSAGRHTYLTPAVAPSIEHHHPVPISSPKPQVEPPTHASHPVPAFSPLPNVAFAHAEPPPKREPAAEQPSTQPHGLSISSSSAGCLRTVKWTSLIFLVLVLHV* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1329 508 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 507 - -
Tpr6g1329 508 MobiDBLite consensus disorder prediction 462 484 - -
Tpr6g1329 508 MobiDBLite consensus disorder prediction 309 424 - -
Tpr6g1329 508 MobiDBLite consensus disorder prediction 355 369 - -
Tpr6g1329 508 MobiDBLite consensus disorder prediction 325 349 - -
Tpr6g1329 508 PANTHER F20B24.21 1 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1329 Tpr-Chr6 14012341 14017746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1329 1 504 C3H Transcription Factor Family AT3G10810 44.722 3.11e-89 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1329 - - gmx:100792490 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1329 6 14012341 14017746 Tpr6g1329 6 14012341 14017746 ECH