Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1312 ATGGAACATAATTTGGGTCAAGAATCTGGTCCTGGAGCTGATAAGTCTAGGGTTTTGAATGTGAAGCCTTTGAGGACTCTTGTTCCTGTGTTTCCTTCACCGTCCAATCCTTCGTCGTCTTCAACTCCACAAGGTGGTGCTCCTTTTGTATGTGTTTCTCCTGCAGGACCTTTTCCATCTGGTGTTGCACCGTTTTACCCTTTCTTCGTCTCGCCAGAGTCTCAGAGGCTTTCTGAACAGCATGCACCGAACGCAACTCCTCAACGTGCCACACCAATATCTACTGCTGTTCCAATTAATTCATTCAAGACTCCAATTGCGGCGACAAATGGAGATGTGGGTTCTTCACGGAAGAATAAGGGGAGTCGTGGTGGACAACTCACAGGGGAAGACGGTTACGACAATGAAGTAATTGATTTAGAAGATGGAACTGGAGATGGGAGTTCAAAGCAGCGCAAGAAGAGGGGAAGGGCAAAGCGTGCTAGTGGTGCTGGTACTGCTGGTAGTGGTGCCAGTGCGGTTACTATTGAGGTTGATTTGGATGCCGTTGCTAATGATATTCTTCAAACAATTAACCCCATGGTTTTTGATGTGATAAACCATCCTGATGGTAGTAGGGATTCAGTTTCATTTACACTTATGATATATGAAGTGCTGCGAAGGAAGCTTGGACAAATTGAAGAGTCAACAAAGGATGCTAATTCTGGAGCGAAGCGGCCTGATTTGAAGGCAGGAACGGTTATGATGACTAAAGGGGTTAGGAGTAACAGCAAGAAAAGGATTGGAATTGTGCCCGGTGTTGATGTTGGGGATATTTTCTATTTCCGGTTTGAGATGTGCTTAGTGGGACTACATTCACCTTCTATGGCTGGAATTGATTACTTGGGTTCCAAAGCAAGTCAAGAGGAAGAGCCATTGGCTGTTAGTATTGTCTCATCTGGAGGTTATGAAGATAATACCGACGATGGAGATGTGCTAATTTACAGTGGTCAAGGTGGAGTCAACCGCGACAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCTTTGGAGAAGAGCATGCATAGAGGTAATGATGTGAGAGTAATTAGGGGTTTGAAGGATGTAATGCATCCAACTGGGAAGGTATATGTCTATGACGGCATGTACAGGATTCAGGACTCATGGGTGGAGAAAGCAAAATCTGGTTTCAATGTATTTAAGTATAAATTGGTAAGGGTGCAGGGACAACCTGCAGCATATACGATATGGAAATCTGTTCAACAATGGACCGATAAGTCGGTTCCAAGAACAGGGGTTATATTGCCTGATCTTACTTCTGGGGGTGAAAAAGTACCTGTTTGTCTTGTGAATGATGTTGATAACGAGAAGGGCCCTGCATATTTCACTTACATCCCTACTCTCAAGAATCCGAGGCCAGTTGCTCCTTTGGAGTCTTCTGCTGGATGCTCTTGTATTGGTGGTTGTCAACCTGGAAATTTTAACTGTCCTTGCATTCAAAAGAACGGAGGTTATCTCCCTTACTCTGCAGCCGGGTTAGTCGCGGACCTAAAATCCGTGATACATGAGTGCGGTCCTTCATGTCAGTGTCCTCCTACTTGCCGAAGCCGGGTTTCCCAAGGTGGACTGAAGTTTCGTTTGGAGGTGTTCAGAACCAACAATAAAGGATGGGGTCTAAGATCATGGGATGCTATTCGTGCTGGAACTTTTATATGTGAGTATGCAGGAGAAGTAATAGATAATGCTAGAGCTGAGATGCTATTTGCTGAAAATGATGATGAATACATTTTTGATTCTACTCGCATTTATCAGCAATTGGAAGTTTTTCCTGCTGACATCGAAGCTCCTAAGATCCCGTCTCCACTGTATATAACAGCGAAAAATGAAGGGAATGTTGCTCGGTTTATGAATCACAGCTGCTCTCCAAATGTATTATGGCGTCCAATTGTACGTGACAATAAGAATGAATCAGATCTCCACATTGCTTTCTTTGCAATTAGACACATCCCTCCGATGATGGAGTTAACTTATGATTATGGGACAAATCTTCCTCTCAAAGCTGGGCAAAGGAAAAAGAAATGCTTATGTGGATCTGTGAGATGCAGGGGATACTTTTGTTAA 2127 0.4386 MEHNLGQESGPGADKSRVLNVKPLRTLVPVFPSPSNPSSSSTPQGGAPFVCVSPAGPFPSGVAPFYPFFVSPESQRLSEQHAPNATPQRATPISTAVPINSFKTPIAATNGDVGSSRKNKGSRGGQLTGEDGYDNEVIDLEDGTGDGSSKQRKKRGRAKRASGAGTAGSGASAVTIEVDLDAVANDILQTINPMVFDVINHPDGSRDSVSFTLMIYEVLRRKLGQIEESTKDANSGAKRPDLKAGTVMMTKGVRSNSKKRIGIVPGVDVGDIFYFRFEMCLVGLHSPSMAGIDYLGSKASQEEEPLAVSIVSSGGYEDNTDDGDVLIYSGQGGVNRDKGASDQKLERGNLALEKSMHRGNDVRVIRGLKDVMHPTGKVYVYDGMYRIQDSWVEKAKSGFNVFKYKLVRVQGQPAAYTIWKSVQQWTDKSVPRTGVILPDLTSGGEKVPVCLVNDVDNEKGPAYFTYIPTLKNPRPVAPLESSAGCSCIGGCQPGNFNCPCIQKNGGYLPYSAAGLVADLKSVIHECGPSCQCPPTCRSRVSQGGLKFRLEVFRTNNKGWGLRSWDAIRAGTFICEYAGEVIDNARAEMLFAENDDEYIFDSTRIYQQLEVFPADIEAPKIPSPLYITAKNEGNVARFMNHSCSPNVLWRPIVRDNKNESDLHIAFFAIRHIPPMMELTYDYGTNLPLKAGQRKKKCLCGSVRCRGYFC* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1312 708 SUPERFAMILY SET domain 423 688 IPR046341 -
Tpr6g1312 708 MobiDBLite consensus disorder prediction 77 170 - -
Tpr6g1312 708 SMART set_7 547 688 IPR001214 GO:0005515
Tpr6g1312 708 Pfam SET domain 558 682 IPR001214 GO:0005515
Tpr6g1312 708 SUPERFAMILY PUA domain-like 244 426 IPR015947 -
Tpr6g1312 708 MobiDBLite consensus disorder prediction 77 123 - -
Tpr6g1312 708 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 19 707 IPR025794 GO:0016571
Tpr6g1312 708 MobiDBLite consensus disorder prediction 1 48 - -
Tpr6g1312 708 MobiDBLite consensus disorder prediction 31 47 - -
Tpr6g1312 708 SMART preset_2 437 531 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tpr6g1312 708 Pfam SAD/SRA domain 261 412 IPR003105 -
Tpr6g1312 708 ProSiteProfiles Post-SET domain profile. 692 708 IPR003616 -
Tpr6g1312 708 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 10 707 - -
Tpr6g1312 708 Gene3D SET domain 430 707 IPR046341 -
Tpr6g1312 708 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 10 707 - -
Tpr6g1312 708 ProSiteProfiles SET domain profile. 547 682 IPR001214 GO:0005515
Tpr6g1312 708 SMART G9a_1 257 412 IPR003105 -
Tpr6g1312 708 Pfam Pre-SET motif 442 539 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tpr6g1312 708 Gene3D - 244 429 IPR036987 -
Tpr6g1312 708 ProSiteProfiles YDG domain profile. 262 408 IPR003105 -
Tpr6g1312 708 ProSiteProfiles Pre-SET domain profile. 483 544 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1312 Tpr-Chr6 13614339 13618779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1312 14 707 Su(var)3-9 homologs AT1G73100 47.479 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tpr6g1312 SAD_SRA 1.1e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1312 K24405 - gmx:100805932 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1312 6 13614339 13618779 Tpr6g1312 6 13614339 13618779 ECH