Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1308 ATGGAACTCTTCTTCTCACATGAATCACTCATCTTCATCCTCTCCCTTATCTTCCTCTATCTCTTCTACTTTCACTTCTCCACCACATCAAAAAAACACAACAACAATCATGGCTTCAAAACCTACCCTCTACTTGGAACCTTACCTGAATTCATACTAAACCGCCACCGTTTCCTCGACTGGACAACTCAAATCCTCCGTAACTGTCCAACCAACACCGCCGTCTTCATCCGTCCCGGTAAAATCCACGGCATCATAACAGCCAATCCAGATAACATCCAACACATTCTCAAAACAAAATTCGAAAACTATCCAAAAGGTGAAAGATTCATCAGCCTCCTTCAAGATTTTCTTGGCAACGGTATCTTCAACTCCGATGGTGATCTCTGGAAGCTTCAGAGAAAAACCGCCAGCTACGAATTCAACACGAAATCGCTACGAAATTTCATCGTCGAAAACGTAACCGTCGAAACACAAACGAGACTCATTCCGATTCTAACAAAAGCAACGGAAAACAACCAGATTCTTGATTTGCAGAATCTTTTAGAACGGTTTGCATTCGATAATGTTTGTAAACTAGCGTTTAACGTTGATCCTGGTTGTCTCGGCGCCGATGTTACCACCGGAGCCGCCTCCACCACCGCCGCAGAAGCCTTCATGCACGCGTTTGAAGATGCATCAATGATAAGTTCTGGAAGGTTCATGTATCTTTTACCATTGTTATGGAAAATGAAAAAATATCTTAACGTTGGAACAGAACGGAGATTGAAACAATCAATCGCAACCGTTCATGAGTTTGCTGATGAGATTATACGGTCGAGAAGGGAAGCTAAAGAAGCTGGTCAAGATTTGTTATCTCGTTTCATTGGAACCGAAGAAGCTTCGCCGGAGTTTCTTCGCGATATTATAATAAGCTTTATTCTCGCTGGGCGCGATACTACATCGTCCGCTTTGAGTTGGTTGTTCTGGATTTTATCTTCAAAAAGCGACATTAAAGATAAAATAATCGAAGAAATTGAAATGGTGCGTTTAAAAAGTGGAAATAAAACGGCTTCGTTTGGATATGAAGAGCTGAAAGAGATGCATTACTTGCAAGCGGCGATTAGTGAGACTATGAGGTTGTATCCGCCTGTACCGATTGATACTAAGGCGTGTTTGAATGACGATGTTTTGCCGGATGGAACTAGGATTAAGAAAGATTGGTTTATATCTTATCATACTTATGCTATGGGGAGAATTGAGAGTATTTGGGGGAAAGATTGTAATGAGTTTAAACCGGAGAGGTGGTTGGAAAATGATAAGGATGGTGTTAGTGTATGTAGAAGTGAGAGTCCATTTCGGTTTCCGGTGTTTCATGCAGGTCCTAGGATGTGTTTAGGGAAAGAAATGGCTTATATTCAAATGAAGTCTATTGCAGCTTCTGTTATGGAAAGGTTTGAGGTTGTTGCATTGGATAAAGACAATTGTCCTGAACATGTTTTGTCTTTGACTTTGAGGATGAAAAATGGGTTACCTGTGAATGTAAAGAGAGTAAGGTAA 1539 0.41 MELFFSHESLIFILSLIFLYLFYFHFSTTSKKHNNNHGFKTYPLLGTLPEFILNRHRFLDWTTQILRNCPTNTAVFIRPGKIHGIITANPDNIQHILKTKFENYPKGERFISLLQDFLGNGIFNSDGDLWKLQRKTASYEFNTKSLRNFIVENVTVETQTRLIPILTKATENNQILDLQNLLERFAFDNVCKLAFNVDPGCLGADVTTGAASTTAAEAFMHAFEDASMISSGRFMYLLPLLWKMKKYLNVGTERRLKQSIATVHEFADEIIRSRREAKEAGQDLLSRFIGTEEASPEFLRDIIISFILAGRDTTSSALSWLFWILSSKSDIKDKIIEEIEMVRLKSGNKTASFGYEELKEMHYLQAAISETMRLYPPVPIDTKACLNDDVLPDGTRIKKDWFISYHTYAMGRIESIWGKDCNEFKPERWLENDKDGVSVCRSESPFRFPVFHAGPRMCLGKEMAYIQMKSIAASVMERFEVVALDKDNCPEHVLSLTLRMKNGLPVNVKRVR* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1308 512 Pfam Cytochrome P450 38 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1308 512 Gene3D Cytochrome P450 19 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1308 512 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1308 512 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1308 512 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1308 512 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1308 512 SUPERFAMILY Cytochrome P450 31 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1308 512 Coils Coil 511 512 - -
Tpr6g1308 512 PANTHER CYTOCHROME P450 14 508 - -
Tpr6g1308 512 PANTHER CYTOCHROME P450 94B3-LIKE 14 508 - -
Tpr6g1308 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Tpr6g1308 512 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1308 512 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1308 512 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1308 512 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1308 512 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1308 Tpr-Chr6 13577977 13579902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1308 31 509 Cytochrome P450 AT3G56630 59.298 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1308 - - gmx:100812147 716.457