Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1303 ATGGAACGACGTAATAGATTGGTTTTTGTATCAGATTTTGTTCTATCTTTCATGTGGGTGTGTTCTGGTGTTCTCGTTAGATTATTCGTCTTCAAAGTTCTTGGCTTTTCTCATACCCATATTGCTGAGATTGTAAAGATTTCATTTTCCATACTCAACATGTTCTTCTTTGCTCTCCTTGGCAAGATTTCTCATGGTGGGGCCTACAATCCTCTCACTGTTTTGTCTGATGCTATCTCTGGAGATTTTCTTAACTTCCTTTTCTGCATTGGTTCTAGAATTCCTGCTCAGGTGTTTGGATCTATTGTTGGAGTTAGACTTCTTATTGAAACCATTCCTGAAGTAGGGAAAGGACCGCGTTTGAATGTTGACATTCATCGGGGAGCATTGACAGAAGGATTACTAACATTTGCAATTGTAAGCATTTCACTTGGACTTGCCGCATCAAAAATCCGTGGAAGTTTCTTCATGAAGACTTGGATTTCCAGCCTCTCCAAGTTAACACTTAATATACTTGGTTCTGATCTGACCGGTGGTGTTATGAACCCCGCATCTGTAATGGGATGGGCTTATGCTCGAGGCGATCACATAACAAAGGAGCACTTCCTTGTATACTGGCTTGCCCCTATAGAGGGAACTATTTTCGCAGTGTGGACATTCAAATTCTTAGTCCGGCCAGTAATACAAGGTACAACAGGCGCAAAAAGTAAATCAGATTGA 720 0.4097 MERRNRLVFVSDFVLSFMWVCSGVLVRLFVFKVLGFSHTHIAEIVKISFSILNMFFFALLGKISHGGAYNPLTVLSDAISGDFLNFLFCIGSRIPAQVFGSIVGVRLLIETIPEVGKGPRLNVDIHRGALTEGLLTFAIVSISLGLAASKIRGSFFMKTWISSLSKLTLNILGSDLTGGVMNPASVMGWAYARGDHITKEHFLVYWLAPIEGTIFAVWTFKFLVRPVIQGTTGAKSKSD* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1303 239 PANTHER AQUAPORIN SIP2-1-RELATED 7 239 - -
Tpr6g1303 239 SUPERFAMILY Aquaporin-like 8 227 IPR023271 -
Tpr6g1303 239 Gene3D Glycerol uptake facilitator protein. 4 232 IPR023271 -
Tpr6g1303 239 PRINTS Major intrinsic protein family signature 7 26 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr6g1303 239 PRINTS Major intrinsic protein family signature 89 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr6g1303 239 PRINTS Major intrinsic protein family signature 131 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr6g1303 239 PRINTS Major intrinsic protein family signature 163 185 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr6g1303 239 PRINTS Major intrinsic protein family signature 203 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr6g1303 239 Pfam Major intrinsic protein 9 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr6g1303 239 PANTHER AQUAPORIN SIP2-1-RELATED 7 239 IPR044226 GO:0015267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1303 Tpr-Chr6 13549317 13556736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1303 10 239 Major Intrinsic Protein MIP AT3G56950 59.740 2.40e-94 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1303 K09875 - gmx:100786138 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1303 6 13549317 13556736 Tpr6g1303 6 13549317 13556736 ECH