Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1295 ATGCTTCCATTTGTAAAACATGTTCTTTTTGGGACCCCTTATCAACAGTATTTTCAAATTGAAGACCCTCAGGCATTTGCTAATGACCCTCTGGCGTGGTCGAGGCCACTAGTTAGGTATTACTCTGGCGAATTCTCCATGGCTGCGGTTCAGGCGAATGTGGATATGGAAGATAAGTGCCAAGTTGAAGTTGGCATTGATGCACTCTTTGTTGGAATTTATGATGGCCATAAAGGCGACACGGTTTCCATCTATCTTAAAGATCATATCTTCAGGGAACTAATCAGGCTTATTCAGGAGAATAATAACAATATGAATGAGAACATTATGAAGCAAGTTGTTGACCATATGGAGAAAGGTTTTATGGAGTCTGCTGGAAGAAATGTTTTTGTTAGTTCAGGTTGTTTGATTTGTCTCATACGGAGAGGGAAGTTATATGCCGCCAATGTTGGAGACTCGCGCGCTGTACTCGGTTCTCTGAAGGGCATTGGTAAACTTGAAAGATTGGCTGTTAAACAGATTGTTAAAGATCACAATATTGATCATCGAGAAGTTCAATCAGCAATCAGGGACTTGCAGCCAGATTTTCGTGATATAGATTACAATATTAATTTTCGTACCTGTATAATGATTGCAGAAAAAGGTTTAATCGAGACAACTAGATGTATAGGATATGCATATTTGAAGGAGGAGGTCAATGAAAGTGACTCATTTGAAATCCCGAGTTGGGAAAGAGTGCCTGGACGTTTTACAAGACCTTTGCTAACATCGCAACCACATGTTTATTCAAGAATCTTAAGAGACTCTGATAAATTCATTATATTTGGATCTAGTGGATTTTGGAAAGGGATATCAAATAAGGATGCTGCTAAAGTTGTTAACACCAGTCCACGAGATGGAATCGCAGAAAGACTTGCCACACTTGTTTTACAGAAAGGGGCTAATATGAGGGGAACAAGATATAGTCAACTTATAGGGATGCCTAAGAGTAATCAAATTAGTGGGTCGGACACACGCATTCACAATTATTTTCAATTTAGATCGGCTTATCATTATGATATAACTGTAGTTGTTGTATATTTGGACAACAACAGGTCAAATAGGGAGGGTGTGATGCTAGAGATGAACTCCTATAGCAGCTGCGATGACGGATTTCAACAATCAGAGTTTACAAATTTCTATAATAATGCTAATGCGTGA 1200 0.3883 MLPFVKHVLFGTPYQQYFQIEDPQAFANDPLAWSRPLVRYYSGEFSMAAVQANVDMEDKCQVEVGIDALFVGIYDGHKGDTVSIYLKDHIFRELIRLIQENNNNMNENIMKQVVDHMEKGFMESAGRNVFVSSGCLICLIRRGKLYAANVGDSRAVLGSLKGIGKLERLAVKQIVKDHNIDHREVQSAIRDLQPDFRDIDYNINFRTCIMIAEKGLIETTRCIGYAYLKEEVNESDSFEIPSWERVPGRFTRPLLTSQPHVYSRILRDSDKFIIFGSSGFWKGISNKDAAKVVNTSPRDGIAERLATLVLQKGANMRGTRYSQLIGMPKSNQISGSDTRIHNYFQFRSAYHYDITVVVVYLDNNRSNREGVMLEMNSYSSCDDGFQQSEFTNFYNNANA* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1295 399 SUPERFAMILY PP2C-like 38 363 IPR036457 -
Tpr6g1295 399 SMART PP2C_4 31 359 IPR001932 -
Tpr6g1295 399 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 14 368 - -
Tpr6g1295 399 ProSiteProfiles PPM-type phosphatase domain profile. 41 361 IPR001932 -
Tpr6g1295 399 PANTHER ALPHABET, ISOFORM E-RELATED 14 368 - -
Tpr6g1295 399 CDD PP2Cc 56 315 IPR001932 -
Tpr6g1295 399 Gene3D - 37 369 IPR036457 -
Tpr6g1295 399 Pfam Protein phosphatase 2C 67 315 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1295 Tpr-Chr6 13459670 13461078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1295 31 363 PP2C-type Phosphatase Gene Family AT5G06750 37.609 8.02e-65 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1295 K01102 - csv:101222146 229.95