Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1294 ATGGCTGCAGTTCAGGCGAATAAGGATATGGAAGATCAGAGCCAAGTTGAAGTTGGCACTGATGCACTCTTTGTTGGAGTTTATGATGGACATAAAGGCGACGCCGCTTCCATCTATATTATAGATCATATCTTCACTGAACTATTAAGGATGATTCAGCAGAATAATAACTCTATGAATGAGATTATTCTGAGGCAAGTTGTTGACCAAATGGAGACAGGTTTTAATGAGTTTGCTAGAATTAGTTTTGAGCAACATCATGAGGTACAGAAGAGTTTTGTTAGTTCAGGTTGTTTGATTTGTATCATATGGAAAGGGACGTTATTTGTCGCCAACGTTGGAGACTCGCGCGCTATACTCGGTTCTCAGAAGGGCATTGGTAAAAGATTGGTTGTTAAACAGATGGTTAGTGATCACAGTTTTCTAAATCCAGATATTAAACAAGAATTCACTGAATTGCATCCAGATTATAATAATCGTAGTCGCTACCATAGCATTGAAGTTAAAGGCTTAATCGAGACAAGTAGATGTATAGGATATGCATATATGAAAAATGCACTGTTCACCAAAAGGAGATCATTCGAAATCCCATTGTCTGAAGTAGTGACTCCACCTTTTACAAGACCTTTGCTATCATCACAGCCAGAAGTTTTTTCAAGAGTCTTAAGTGACAGTGATAGATTCATTATATTTGGATCTGGTGGATTTTGGAAATTGATTTCAAATGAGAAGGCTGCTAGAGTTGTTAACACCAGTCCACGAGATAGAATCGCTGAAAGACTTGCCATGCTTGCTCTAGAGAAGGGGGCTGGTAAAAGGCGGATAAAATATCGTGACCTTATAGAGATTCCTAAGAGTAATTGTATTAGTGGGAACAATGGCAATCAAAATTATGGATTTAGATCGGCTTATCATGATGATATAACTGTGATTGTTGTCTATTTGGACCAAAGGCCATATAGGGAGGGTGTGACGCCAAAGATCAACTCCTATGCAGGCTACGATTACGCAGTTCAACAATCAGAGTTTACAAATTTCTATAATAATGCTAATGTGTGA 1059 0.3824 MAAVQANKDMEDQSQVEVGTDALFVGVYDGHKGDAASIYIIDHIFTELLRMIQQNNNSMNEIILRQVVDQMETGFNEFARISFEQHHEVQKSFVSSGCLICIIWKGTLFVANVGDSRAILGSQKGIGKRLVVKQMVSDHSFLNPDIKQEFTELHPDYNNRSRYHSIEVKGLIETSRCIGYAYMKNALFTKRRSFEIPLSEVVTPPFTRPLLSSQPEVFSRVLSDSDRFIIFGSGGFWKLISNEKAARVVNTSPRDRIAERLAMLALEKGAGKRRIKYRDLIEIPKSNCISGNNGNQNYGFRSAYHDDITVIVVYLDQRPYREGVTPKINSYAGYDYAVQQSEFTNFYNNANV* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1294 352 ProSiteProfiles PPM-type phosphatase domain profile. 1 315 IPR001932 -
Tpr6g1294 352 PANTHER ALPHABET, ISOFORM E-RELATED 3 320 - -
Tpr6g1294 352 Pfam Protein phosphatase 2C 22 270 IPR001932 -
Tpr6g1294 352 Gene3D - 1 321 IPR036457 -
Tpr6g1294 352 CDD PP2Cc 5 315 IPR001932 -
Tpr6g1294 352 SUPERFAMILY PP2C-like 7 317 IPR036457 -
Tpr6g1294 352 SMART PP2C_4 2 313 IPR001932 -
Tpr6g1294 352 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 3 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1294 Tpr-Chr6 13456744 13458120 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1294 1 348 PP2C-type Phosphatase Gene Family AT5G06750 38.483 1.89e-73 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1294 K01102 - gmx:100813740 238.039