Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1290 ATGGCTTCGGAGAAAGAAGCTGCTCTTGCAACTACTGCCTCTGAATCTAATCCTCCCACTATGTTTGACAGGAGTAACATCAAAAGGGAAAATCCTTCTACTGTATTTTACGAGGATGATGAGGTCCTTGCTTATAAGGATATAGCTCCTGAAGCTCCTCCCCATATTATAATCATTCCCAAAGCTAGAGACGGGTTGAATGGTCTACCTAAGGCTCAAGTCCCGCTGATTTCAAGCCAAGTTGGGTTGAAGAATGTTACGCTCGATGAATTACTACAATCAACTAAAAAAGGACGAAGAACTAAGTTTACTCCGGGAGAAGATAAAGTTCTCATCCAAGCATGGCTAAATGTTCCCAAGAATGCAGCTGCTGAGGCAAACCAAAGAGTAGATTCCTTTTGGTTAAGAATTAAAAACAATTACAATAAGCATCGTGGCCATTTCAAACCAAGGGGAAATTCACAATTAAAATCACGTTGGCATAAGGTGAATAGCATAGTTCATAAATTTGTAGCGTGCTACAAAGCAGCCAATGAGAAAAAGAAAAGTGGTAGCTCTGAGTCTGACATCATGGGAGATGCATATACGCTTTTTTATCAAGACGAAGGTGACCAGTTCAAGTTAGAGCATGCATGGCGATTGTTGAAAGATGAGCCTAAATGGTTAAATTCATCGTTTGAAGGATCTACTAAAAGAACCAAGATTTCCGCTTCTGGAGCATACTCGACCACTTCTAATCTGAACATGCCATCAAATTGTGAATACAATGCAGTGTCACCTACCGTGGTTTGTCCAGCAGGGACAGAAGTAGAGAAAAGAAAGGGAACATCAAAATCAGAGGAAACATCGTCTGTGGTTTGTCTGACGGGGACAGAAGTAGAGAAAAGAAAGGGAACATCAAAATCAGAGGAAACATCGTCTGTGGTTTGTCTGACAGGGACAGAAGTAGAGAAAAGAAAGGGAACATCAAAATCAGAGGAAACATCGTCTGTGGTTTGTCCGACGGGGACAGAAGTAGAGAAAAGAAAGGGAAAATCAAAATCGGAGGAAACATCTTCTGCTAATGTTGAGCTAATTGAAGTGCAAGAAATTCCAAAAAAAAAAGTTCTTGTCATGGCAGAAATGGCACGCGTCCAGGATGAACAAAACAAGTTGAAGGAGAAAGAGTTGAATATGAAGGAGAGAGAGTTTGAGTTGGAGTTCCTCTTTAAGGATACATCCGGGATGACAGCCAGACAACAACGAGATCATGAGATGTTGTGTAATGTGATTAGAGAAAAATACGGAATTATGTAA 1296 0.4066 MASEKEAALATTASESNPPTMFDRSNIKRENPSTVFYEDDEVLAYKDIAPEAPPHIIIIPKARDGLNGLPKAQVPLISSQVGLKNVTLDELLQSTKKGRRTKFTPGEDKVLIQAWLNVPKNAAAEANQRVDSFWLRIKNNYNKHRGHFKPRGNSQLKSRWHKVNSIVHKFVACYKAANEKKKSGSSESDIMGDAYTLFYQDEGDQFKLEHAWRLLKDEPKWLNSSFEGSTKRTKISASGAYSTTSNLNMPSNCEYNAVSPTVVCPAGTEVEKRKGTSKSEETSSVVCLTGTEVEKRKGTSKSEETSSVVCLTGTEVEKRKGTSKSEETSSVVCPTGTEVEKRKGKSKSEETSSANVELIEVQEIPKKKVLVMAEMARVQDEQNKLKEKELNMKEREFELEFLFKDTSGMTARQQRDHEMLCNVIREKYGIM* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1290 431 PANTHER OS07G0575233 PROTEIN 94 292 - -
Tpr6g1290 431 MobiDBLite consensus disorder prediction 9 27 - -
Tpr6g1290 431 Pfam HIT domain 28 62 IPR011146 GO:0003824
Tpr6g1290 431 PRINTS Histidine triad family signature 22 38 IPR001310 -
Tpr6g1290 431 PRINTS Histidine triad family signature 43 61 IPR001310 -
Tpr6g1290 431 PANTHER - 94 292 - -
Tpr6g1290 431 SUPERFAMILY HIT-like 27 62 IPR036265 -
Tpr6g1290 431 Coils Coil 371 398 - -
Tpr6g1290 431 MobiDBLite consensus disorder prediction 1 27 - -
Tpr6g1290 431 Gene3D - 1 148 IPR036265 -
Tpr6g1290 431 MobiDBLite consensus disorder prediction 316 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1290 Tpr-Chr6 13436776 13443660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1290 91 246 Glutathione S-transferase Gene Family AT5G41240 38.690 9.93e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1290 - K00799 mtr:MTR_7g088160 600.127