Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1288 ATGGGATCTCATGGTGGAGCAACAATTCAAGAGGCAAAGACTGGAACTTTGGCTAAAGAAGGATCTTTGTATAATCTCACACTTGATGAGGTTCAAAATCAGCTTGGAAATTTAGGGAAACCCTTAGGAAGTATGAATCTAGATGAACTACTTAAGAGTTTGTGGACATCTGAAGCTGCTCAAGCTTCTGGATTGGATTCTAGTGCTACTGATGGTTACATGCAGAATGGTCAACTAGCTTCTGGTTCATCTATGAATCCATTAAATCTTTCTGGTGACCTTAGTAAGAAGACTATTGATGAGGTTTGGAGAGACATGCAACAGAAGAAGAGTAGTAGTCAGGATAGGAGAACAGCTACTGCTACACTAGGTGAGATGACTTTGGAAGATTTCTTGATGAAAGCTGGTGTGGCTACTGAAACTTTTCCTTCTGAGGATAATGCTATGTCAGGAAGGGTTGATTCTCAATCTCAAGAACAACATAATGCATCTCAGGCTCAGCATGGTCATTGGATGCAGTACCAAATCCCTTCGGCTCAGCAACAACAACAACAGCATCAGCATCAAAATAATCAGAATAATATGATGACTGGTTTTGCAGGTTATATGGCTGGTCATGTGGTTCAACATCCTGTTTTGGATGCAGGATACACTGAAGCAATGTTGAGTTTGTCGCCGTCTTCTTTAATGGCTAATTCGTCAGATACACAAACTCAAGGGAGGAAAAGAGTTGCCTCTGGTGTTGTGGTTGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATTAAGAATAGGGAATCTGCAGCTCGGTCGCGGGCTAGAAAACAGGCTTACACACAAGAACTGGAGATCAAAGTTTCGCATTTAGAAGAAGAGAATGAAAGGCTTAAACGACAACACGAGATAGAGAGAGTGTTGCCAAGTATGCCACCACCAGACCCTAAGCATCAGCTGCGCAGAACTAGCTCAGCTCCACTTTGA 981 0.4261 MGSHGGATIQEAKTGTLAKEGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSLWTSEAAQASGLDSSATDGYMQNGQLASGSSMNPLNLSGDLSKKTIDEVWRDMQQKKSSSQDRRTATATLGEMTLEDFLMKAGVATETFPSEDNAMSGRVDSQSQEQHNASQAQHGHWMQYQIPSAQQQQQQHQHQNNQNNMMTGFAGYMAGHVVQHPVLDAGYTEAMLSLSPSSLMANSSDTQTQGRKRVASGVVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSHLEEENERLKRQHEIERVLPSMPPPDPKHQLRRTSSAPL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1288 326 Gene3D - 254 305 - -
Tpr6g1288 326 PANTHER BZIP TRANSCRIPTION FACTOR 3 324 - -
Tpr6g1288 326 Pfam bZIP transcription factor 256 299 IPR004827 GO:0003700|GO:0006355
Tpr6g1288 326 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 259 274 IPR004827 GO:0003700|GO:0006355
Tpr6g1288 326 SUPERFAMILY Leucine zipper domain 256 302 IPR046347 GO:0003700|GO:0006355
Tpr6g1288 326 SMART brlzneu 252 320 IPR004827 GO:0003700|GO:0006355
Tpr6g1288 326 Coils Coil 279 306 - -
Tpr6g1288 326 MobiDBLite consensus disorder prediction 144 169 - -
Tpr6g1288 326 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 254 299 IPR004827 GO:0003700|GO:0006355
Tpr6g1288 326 MobiDBLite consensus disorder prediction 65 93 - -
Tpr6g1288 326 MobiDBLite consensus disorder prediction 303 326 - -
Tpr6g1288 326 CDD bZIP_plant_BZIP46 256 301 - -
Tpr6g1288 326 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 3 324 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1288 Tpr-Chr6 13386350 13390196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1288 7 326 bZIP Transcription Factor Family AT3G56850 55.488 2.74e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr6g1288 bZIP_1 4.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1288 K14432 - gmx:100783666 397.897