Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1253 ATGTCCTCTCTCCCAGAAGAACTATGGACCAAAATTCTCGAACTCGGAATCCAAAATAGCGGTTTAACCTACGAGGACCTTTGCTGGATCTCCATCTCATGCCGTCTCCTTCATCGTCTCTCCTCCGAAGACTCTCTCTGGAACCATCTTCTCTCCACCGACTTCCCTCTTTTTCCTGCTTGCTCTTTTCCTTATTGGTCTTCCAAATCCCTTTATCTTTTAAGAATCAAGGAGAGGATTTTGATCGAAGCTGCATATCAACAACGTCTAGTGGAAGAGCAGATTCTTCACTACCAAGAGCAACAAGAGATTGAACTGAGCAAACAGCACCATCCTGAAGACCTCATTGAGAAGAAGCGGCTCAGTCGTATGGTGGAAAATAAAGAGATATACATAGAGAAAGTTGTCAATCGTCGGCTAGTTGAATTTAACCGGCAAGTAGAAGAATTTAACCGATTGAAGAGAGCAAGGGAAAAAATGAGAAAATTGAAGTATTATCTTCAGTTGCAAGAGGCTAATAGAAAAAAGCAGGAAGAGACTGAACGCTTAGCAAAGTTGGCTGAAATTCATTATAAGCAGAGGAAAAGAGAAATAGAAATTGCAGGTCTTTATCATAAGAAATGGTAA 627 0.4099 MSSLPEELWTKILELGIQNSGLTYEDLCWISISCRLLHRLSSEDSLWNHLLSTDFPLFPACSFPYWSSKSLYLLRIKERILIEAAYQQRLVEEQILHYQEQQEIELSKQHHPEDLIEKKRLSRMVENKEIYIEKVVNRRLVEFNRQVEEFNRLKRAREKMRKLKYYLQLQEANRKKQEETERLAKLAEIHYKQRKREIEIAGLYHKKW* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1253 208 Gene3D - 1 139 - -
Tpr6g1253 208 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 80 199 - -
Tpr6g1253 208 Coils Coil 153 189 - -
Tpr6g1253 208 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 80 199 IPR027512 GO:0005852
Tpr6g1253 208 SUPERFAMILY F-box domain 1 75 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1253 Tpr-Chr6 12935757 12937971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1253 81 198 Eukaryotic Initiation Factors Gene Family AT4G11420 43.056 6.58e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1253 K03254 - gmx:100803796 126.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1253 6 12935757 12937971 Tpr6g1253 6 12935757 12937971 ECH