Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1245 ATGGATTTTTTACAAACACCAGAAAATCAGATACTTGTTGGTGTTGTTGTGGCTGTTGTAGCCATTGGTGTTGGTGCTGTCTATCTCTTTTCATCTAAAAAGTCCAAAGCTTGCTTGAACCCAGAGCAGTTCAGGGAGTTTAAACTTGTTAAGAAAGCACAGCTGAGCCATAATGTTGCAAAATTCACGTTTGAACTCCCAACACCTACTTCTGTTTTGGGACTTCCAATTGGACAACACATAAGTTGCAGGGGTAAGGATGCTCAAGGTGATGAGGTTATCAAACCATATACTCCTACAACTTTGGATTCTGATGTTGGACATTTTGAACTAGTTATCAAGATGTACCCTCAAGGAAGGATGTCACACCATTTCCGTGAGATGCGTGTTGGTGACTCTCTTGCTGTGAAAGGACCAAAGGGACGTTTCAAGTACCAACCGGGTGAGGTTAGAGCATTTGGAATGCTTGCCGGAGGGTCTGGAATCACTCCAATGTTCCAAGTAGCTAGAGCTATATTAGAAAACCCAAGCGACAAGACCAAGGTGCATCTTATCTATGCCAATGTTACATATGAGGACATTCTTTTGAAGGAAGAACTTGATGGCCTTGCTAGTAACTATCCGGACCGATTCAAAATATACTATGTGTTAAATCAGCCTCCTGAGATATGGGATGGCGGCGTTGGATTTGTATCAAAGGAGATGATTCAAGCACATTTGCCTCCTCCAGCACAAGATATTAAGATTCTGAGATGTGGCCCGCCACCAATGAACAAGGCAATGGCTGCTCACCTTGAATCCCTGGAATATGCTCCTGAGTCGCAGTTCCAGTTTTGA 837 0.4325 MDFLQTPENQILVGVVVAVVAIGVGAVYLFSSKKSKACLNPEQFREFKLVKKAQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDAQGDEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDSLAVKGPKGRFKYQPGEVRAFGMLAGGSGITPMFQVARAILENPSDKTKVHLIYANVTYEDILLKEELDGLASNYPDRFKIYYVLNQPPEIWDGGVGFVSKEMIQAHLPPPAQDIKILRCGPPPMNKAMAAHLESLEYAPESQFQF* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1245 278 CDD cyt_b5_reduct_like 47 278 - -
Tpr6g1245 278 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 278 - -
Tpr6g1245 278 Pfam Oxidoreductase NAD-binding domain 155 261 IPR001433 GO:0016491
Tpr6g1245 278 Gene3D Translation factors 33 135 - -
Tpr6g1245 278 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 134 274 IPR039261 -
Tpr6g1245 278 PRINTS Cytochrome B5 reductase signature 73 84 - -
Tpr6g1245 278 PRINTS Cytochrome B5 reductase signature 95 102 - -
Tpr6g1245 278 PRINTS Cytochrome B5 reductase signature 131 145 - -
Tpr6g1245 278 PRINTS Cytochrome B5 reductase signature 154 173 - -
Tpr6g1245 278 PRINTS Cytochrome B5 reductase signature 192 203 - -
Tpr6g1245 278 PRINTS Cytochrome B5 reductase signature 248 256 - -
Tpr6g1245 278 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 278 IPR001834 GO:0016491
Tpr6g1245 278 Pfam Oxidoreductase FAD-binding domain 47 145 IPR008333 -
Tpr6g1245 278 Gene3D - 136 278 IPR039261 -
Tpr6g1245 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 154 173 IPR001709 GO:0016491
Tpr6g1245 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 192 203 IPR001709 GO:0016491
Tpr6g1245 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 248 256 IPR001709 GO:0016491
Tpr6g1245 278 SUPERFAMILY Riboflavin synthase domain-like 38 147 IPR017938 -
Tpr6g1245 278 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1245 Tpr-Chr6 12850043 12854545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1245 2 278 NADPH P450 reductases AT5G17770 82.374 1.04e-166 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1245 K00326 - gmx:100816447 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1245 6 12850043 12854545 Tpr6g1245 6 12850043 12854545 ECH