Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1233 ATGGATGAAAATGTATGGAATTCTTGTTTGAAGAAGAAACTGAGGCAAAAAGGTATAGATCCTGTAACTCATAAACCATTATCTGATATTGAGAATAATAATGGAGAAGAAAATTCAAATGCAAAGAGTCAAGAAAAAGCAGCAGAGTTATTATTATCATCAAATGAATTGAATCTTTTGAAATCAGAAAGTTCAAAATCAGATGCAGCTTCTAATTATGAGCAAAGAACATCACCAAAAGAATATGCATTTGAAATTGAAGGTTCTTGCAACAAAGATTTTTTCATTGACAGGTTCATTAGTACTACTCCTCATCATCATCACAATCACAATACAAATTCTCAAGATCTGATGGGAAATTTTCCAATTCAGATGAGTTATTCAAACACTGAAAATGATTGTTTACCAAATGATTCAAACAATCATAATCATAATTGGTTTAGCCAAACTGGAAAAACATTTGATATGAATTCTAATGAATTTCATTTCAATTCCAACACAACAACTATGTTTCTTCCAAATTCTTTTGATATTCATTCTGACAATGTTTCTACTGAGATGAGAACTTACCAAACCAAACCCGAATTTGTGAACCTTCAGAGCCCATGA 609 0.3087 MDENVWNSCLKKKLRQKGIDPVTHKPLSDIENNNGEENSNAKSQEKAAELLLSSNELNLLKSESSKSDAASNYEQRTSPKEYAFEIEGSCNKDFFIDRFISTTPHHHHNHNTNSQDLMGNFPIQMSYSNTENDCLPNDSNNHNHNWFSQTGKTFDMNSNEFHFNSNTTTMFLPNSFDIHSDNVSTEMRTYQTKPEFVNLQSP* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1233 202 PANTHER MYB DOMAIN PROTEIN 55 4 178 - -
Tpr6g1233 202 PANTHER HOMEODOMAIN-RELATED 4 178 - -
Tpr6g1233 202 MobiDBLite consensus disorder prediction 17 47 - -
Tpr6g1233 202 MobiDBLite consensus disorder prediction 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1233 Tpr-Chr6 12690797 12691405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1233 3 34 MYB Transcription Factor Family AT1G57560 68.750 1.80e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1233 K09422 - gmx:100815881 179.104