Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1231 ATGGAAGATAAGATGCAACATAACCCCCCTAACAACACTCCAACCCAACATGGTTCCGAGAAAACTGAACCGGTTAGGTCAAGATGGACACCAAAACCAGAACAAATTCTCATACTTGAATCCATCTTCAATAGTGGTATGGTTAATCCACCAAAAGAAGAAACCATCAAAATAAGAAAACTTCTTGAAAAATTTGGCAACGTCGGCGACGCGAACGTTTTTTACTGGTTTCAAAACCGCCGGTCTAGATCTCGTCGCCGACAACGCCAGATGCAACAAGCAACACTTGATCAACAAAAAAATCAGATGTTGATGATGCAACAACCTCAACAAGTTGTTGTTAATGATGGTGCAAGTGCAATGAATAATTCATGTGATATGGTTCAAACTAATTATCCAATAATAGGTGGTTTTGGTGGTGGTTCTTCTTGTTTGAATGATACTTCTGGTTCTTCTTCTTCTTCTTCTTCATGTGGTGGTGTTGTTAGTGGTCAACAAGGCATGGATGGTTTCTTTTCAGTTTCTTCTCAAATGGGTTTTCTTGGAATTGATCAAACTTTGAATCCATCTTCACTTTTGTGCCCTCCTTTTTCCTCCAATTTGAACTATCACTCTGGATATGGAGGTGCTGCTACAGGATTGATAACAGTGTTTATCAATGGAATAGCAACAGAAATTCAGGCAGGGCCAATAGACATCAAAACAGTGTTTGGAGATGATGTGATGTTAGTTCATTCTTCTGGTGTGCCAGTTCCCACAAATGAACATGGCATCTTGATTCAGTGCTTGCATCATGGTGAAAGCTACTTTCTGGTATCAAAGTCAACACAAGTATGA 837 0.3967 MEDKMQHNPPNNTPTQHGSEKTEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWFQNRRSRSRRRQRQMQQATLDQQKNQMLMMQQPQQVVVNDGASAMNNSCDMVQTNYPIIGGFGGGSSCLNDTSGSSSSSSSCGGVVSGQQGMDGFFSVSSQMGFLGIDQTLNPSSLLCPPFSSNLNYHSGYGGAATGLITVFINGIATEIQAGPIDIKTVFGDDVMLVHSSGVPVPTNEHGILIQCLHHGESYFLVSKSTQV* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1231 278 Pfam Homeodomain 26 86 IPR001356 GO:0003677
Tpr6g1231 278 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 275 - -
Tpr6g1231 278 ProSiteProfiles 'Homeobox' domain profile. 22 87 IPR001356 GO:0003677
Tpr6g1231 278 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 275 IPR044558 GO:0003700|GO:0048830
Tpr6g1231 278 SUPERFAMILY Homeodomain-like 19 93 IPR009057 -
Tpr6g1231 278 SMART HOX_1 24 91 IPR001356 GO:0003677
Tpr6g1231 278 Gene3D - 26 94 - -
Tpr6g1231 278 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1231 Tpr-Chr6 12633385 12637499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1231 12 278 Wox Gene Family AT3G03660 48.276 5.41e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Tpr6g1231 Homeodomain 9.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1231 - - gmx:100818735 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1231 6 12633385 12637499 Tpr6g1231 6 12633385 12637499 ECH