Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1229 ATGAATACCACCATTTTATTGATCTTCATATTCTTCGCTATTCTTCCCTTTGCATTTGGTGATCTAAGGGTTGGATTCTATAGTTCTAGCTGTCCAAGTGCTGAGTTGATTGTGCATCGAGTTGTTGAGAGAAGTTTTAACCAAGACAGATCCATAACCGGTGCCTTACTCCGCATGCACTTCCATGATTGCTTTGTTAGAGGTTGTGATGCATCCATATTAATAGATTCGCAAAAGGGAAATCAATCTGAAAAAGTTGCAGGAGCAAACAGGACTGTAAGAGGATACAACCTCATAGACGAAATCAAAAGAATCCTAGAAAATGTATGTCCATTAACGGTTTCATGTGCAGACATAATAGCATTAGCAACAAGAGATTCTGTCGTTTTAGCAGGTGGACCAAGTTACAATGTCCCTACAGGAAGACGCGATGGATTGGTTTCAACTATGGATGATGTACGACTTCCAGGACCAGAATCCTCGGTTGCGGATGTATTACAAGTTTTTAAATCAAAGGGTATGACAATGGAAGAAATGGTTACCCTTTTTGGAGCGCACACCGTTGGATTTACTCATTGTAGTTTCATTAAAAATAGGATTAATAATCAGAGTTTTTCGATGGATAATGATTTAAGAAAAAGGTTAGTTGAGTTTTGTGGTGTCGAAGGCAAAGACCCAGCTGTGTTTTTGGATCAAAACACTTCTTTTGTGTTTGATAATCAATTTTATAATCAAATTTTGTTGGGGAGAGGTATGTTGTCTATTGATCAAAATTTGGCTTTGGATTCAATTTCAAAAGGGGTTGTGACAACTTTTGCTAGAAATGGAGAAAGTTTTCAAGAGAGATTTGCTGATGCAATGATAAAGCTGGGAAAGATTGATGTTTTAGTTGGGAGTCAAGGTGAGATTAGGAAGAATTGCAGAGTTTTCAATTTTTAG 939 0.3738 MNTTILLIFIFFAILPFAFGDLRVGFYSSSCPSAELIVHRVVERSFNQDRSITGALLRMHFHDCFVRGCDASILIDSQKGNQSEKVAGANRTVRGYNLIDEIKRILENVCPLTVSCADIIALATRDSVVLAGGPSYNVPTGRRDGLVSTMDDVRLPGPESSVADVLQVFKSKGMTMEEMVTLFGAHTVGFTHCSFIKNRINNQSFSMDNDLRKRLVEFCGVEGKDPAVFLDQNTSFVFDNQFYNQILLGRGMLSIDQNLALDSISKGVVTTFARNGESFQERFADAMIKLGKIDVLVGSQGEIRKNCRVFNF* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1229 312 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Tpr6g1229 312 CDD secretory_peroxidase 22 310 IPR033905 GO:0004601|GO:0042744
Tpr6g1229 312 PANTHER PEROXIDASE 44-RELATED 12 309 - -
Tpr6g1229 312 Gene3D Peroxidase, domain 2 157 291 - -
Tpr6g1229 312 PANTHER PEROXIDASE 25-RELATED 12 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 Pfam Peroxidase 39 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 Gene3D - 26 308 - -
Tpr6g1229 312 ProSiteProfiles Plant heme peroxidase family profile. 21 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 SUPERFAMILY Heme-dependent peroxidases 21 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 PRINTS Plant peroxidase signature 229 244 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 PRINTS Plant peroxidase signature 245 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1229 312 PRINTS Plant peroxidase signature 285 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1229 Tpr-Chr6 12583772 12587760 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1229 1 311 Peroxidase AT4G26010 53.526 1.89e-117 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1229 K00430 - gmx:100820340 404.831