Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1224 ATGAAGCAGATATCAATCATCCTGTTTTTCTTTATACTTCCTTTGGCATTTGCTGATCTACAATTAGGATTCTATGCCTCTTCTTGTCGAAAAGCCGAGTCCATCGTGCATAAAGTTGTACAGAAGCGATTCAATCGCGACAAATCCATAACTGCAGCCTTGCTTCGCATGCATTTTCATGATTGTTTTGTTAGAGGTTGTGATGCATCCCTCCTCATAGACCCAACCAAGAACAACACATCAGAGAAACAAACAGGCGCGAACGCTAGTGTTAGAGGCTATGATCTAATCGACGATGTAAAGGAAGCAATTGAAGCTACATGTCCTTCAACAGTTTCATGTTCCGACATCATAGCACTTGCTACACGAGATGCCGTTGCCTTATCAGGAGGACCAAAGTACAACGTTCCAACGGGAAGACGCGATGGATTAGTCTCCAATAGTATTGATGCTAATATTCTACCGGGACCTAGCTCTCCTATTCCACAGCTAACACAATTTTTTGCTGCAAAAGGAATTACGACCGAAGAAATGGTGACCCTTTTGGGAGCACATACTGTTGGTGTTGCTCATTGCGGTTTCTTCGCAAATTCTATTGGTGACCCTGCATTGAATACTAAGCTTGTTAACTTGTGTAAATCAAATACTAATGGTGCTGCATTTTTGGATCAGAATACTTCTTTTGTTGTTGATAATGAATTTTACAAGCAGATTCTTCTTAAGAGAGGTATAATGCAGATTGATCAACAACTTGCTTTGGATAAATCTACAAGTACTTTTGTGTCTAATTTTGCTTCAAATGGTGACAAGTTTGTTAAGAGTTTTGCAAGTGCTATGATAAAGATGGGAAAAGTTGGAGTTTTGGTTGGAAAAGAAGGAGAAATTCGCAAGAACTGTAGGGTTTTCAACAAAAGAAATTAG 921 0.3941 MKQISIILFFFILPLAFADLQLGFYASSCRKAESIVHKVVQKRFNRDKSITAALLRMHFHDCFVRGCDASLLIDPTKNNTSEKQTGANASVRGYDLIDDVKEAIEATCPSTVSCSDIIALATRDAVALSGGPKYNVPTGRRDGLVSNSIDANILPGPSSPIPQLTQFFAAKGITTEEMVTLLGAHTVGVAHCGFFANSIGDPALNTKLVNLCKSNTNGAAFLDQNTSFVVDNEFYKQILLKRGIMQIDQQLALDKSTSTFVSNFASNGDKFVKSFASAMIKMGKVGVLVGKEGEIRKNCRVFNKRN* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1224 306 CDD secretory_peroxidase 20 302 IPR033905 GO:0004601|GO:0042744
Tpr6g1224 306 Pfam Peroxidase 36 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 PANTHER PEROXIDASE 10 302 - -
Tpr6g1224 306 SUPERFAMILY Heme-dependent peroxidases 19 303 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 PRINTS Haem peroxidase superfamily signature 223 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Tpr6g1224 306 PANTHER PEROXIDASE 25-RELATED 10 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 Gene3D Peroxidase, domain 2 155 282 - -
Tpr6g1224 306 Gene3D - 24 300 - -
Tpr6g1224 306 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 PRINTS Plant peroxidase signature 221 236 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 PRINTS Plant peroxidase signature 237 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 PRINTS Plant peroxidase signature 277 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 ProSiteProfiles Plant heme peroxidase family profile. 19 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g1224 306 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1224 Tpr-Chr6 12520546 12521837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1224 1 303 Peroxidase AT4G26010 57.419 1.19e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1224 K00430 - gmx:100777946 414.846