Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1199 ATGTCTCAAGGCTTCAATTTTGAGAGAATTTCAATGCTTTTTTTAGAATATAATAACCAAATAAACACTATGGCTTCTGTGTTTCTTGTGTTGGTTACTTTGTTACTTTCTATAAATCATTCAGAGCAACTTCAATCCTCACACTCTCAAACCCTTCTAAGAATTCAACAGCTTTTGAATTTTCCTTCTGCTTTAAGCAACTGGAATAATTCCACAGATTTTTGCAACACAGATTCAAACTCTTCACTCGCTGTAGTATGCTATGAAGATACAATAACTCAACTTCACATAATAGGTGAAGGAAAAACTCAACCATTGCCTAAAAATTTCTCTATTGATTCATTTGTCACTACACTAGTTAAGCTTCCAAGTTTGAAGGTTCTTACATTGGTTTCTCTTGGTATTTGGGGTCCATTACCTGGTAAAATTTCTAGGTTATCGTCGTTGGAAATAGTTAATATGAGTTCGAATCATCTCTACAGTTCGATCCCTATGGAACTTTCGTCACTCTCGAATCTTCAGACACTCATTCTTGACAATAACATGTTTTCTGGTCAGCTTCCTATTTGGATTGATTTGCTTTCAGAATTAACTGTGTTGAGTTTGAAAAGCAATTTGTTTAACGGATCGTTACCGAATTCAGTTAGTAACTTGGAGAATTTGAGAATTCTTTCACTTTCTCATAATAAGTTATATGGATTAGTACCTGATTTGAGTCATTTGAGAAATCTTCAAATACTTGAATTGGATAGTAATGCTTTTGGACCTCAATTTCCTAAGCTTGGTAACAAGTTGGTTACTATTGTGCTAAGAGATAACAAATTCAGGTCTGGTATTCCTGCTGAATTGAGCTCATATTATCAGCTCGAGCGATTCGATATCTCATCGAACACTTTTGTAGGGCCATTCCAACCAACATTGTTGTCACTTCCTTCTATTGCTTACCTCAACATTTCGAGGAACAAATTAACCGGGATGCTTTTCGAGAATGTTTCTTGCAATTCTGAGATTGAAGTTGTTGATTTATCGTCGAATCTTTTAACTGGGAGCTTACCTAAATGTTTAGTTTCAAATTCTAGTGATAGGACTGTTTTGTATGCTAGAAATTGTCTTGAGACGACGAATCAAAATCAGCATCCTCCGCCTTTTTGTCACACTGAAGCCTTAGCAGTGGGAATATTACCTGAGACAAAGAAGAAAAAACAAGTATCAAAGGTAGTTCTTACCCTCGGTATAGTAGGTGGAACTCTTGGTGGAGTAGCACTTGCTTTTCTGATTTTATTTATTTTTAGAAGAGAGAATGCTAGAAGCAAAATGAAGAATCCTCCAACAAGAATAATATCAGAGAATGCAGCTTCTGGATACACCTCTAAGTTGCTTTCTGATGCAAGATATATATCTCAAACAAAGAAGTTTGGAGCACTTGGCCTACCAAACTATAGGAGTTTTTCATTGGAAGAGATTGAGGCAGCTACAAACAACTTTGACACAGCTTCTTTAATGGGTGAAGATTCTTATGGAGAGATGTACAGAGGTCAGCTGAAGAATGGCTCGTTTGTTGTTATTAGATGTGTCAAAATGAATAAAAGATACAGCACTCAAAACTTCATGCAGCACATGGAGCTTATATCAAAACTTAGGCATCGTCATTTAGTCAGCGCTATTGGACACTGCTTTGAATGTTCTTTAGAAGATTCAAGTGTCAGCAAAATATTTCTTGTTTTTGAATACGTACCTAATGGCACACTCAGGAGCTGGACTTCTGATGGACATACTGGAAAATCTCTGAATTGGACCCAACGCATAGGAGCTGCAATTGGAGTAGCAAAGGGAATTCAATTTTTGCATACAGGAATTGTCCCTGGTGTATATTCAAACAATATCAAAATAGAAGATATTTTATTGGATAGAAATTTTGTTGCAAAAATTAGCAGTTATAACCTGCCTCTGTTATCTAACATAGGAAAGGTTCGGCGTGGAAATTCGTCTAATGGATCGAAACATTCTGGTATCAATAAAAGTGGAAAGCATGAAGATAAGTGTGATATATATGACTTTGGAGTAATACTACTTGAAATCATTCTAGGAAGGACAATTAAGACAACAAATGATGCAGAAGCTTTTAAGGATCTGTTGCAAGCAAGCTTAGGAGCTGATGAGGATGCTAGGAGGAGCATTGTTGATCCAGCGATTCGCAAGGCATGTTTGAGTCAATCATTGAAGACAATGATGGAGATATGTGTGAAGTGCCTGTTTAAAGATCCAGCAGAAAGACCCTCCACAGAGGATGTTCTGTGGAATTTGCAGTTTGCTGCACAAGTACAGGATGCTTGGAGAGGGGATTCTCAAAGTAGTGAAGGGTCACCAGGTTCTCCTTTAGAGGCTCGAAGACAGGCCTTTCATTAG 2406 0.3716 MSQGFNFERISMLFLEYNNQINTMASVFLVLVTLLLSINHSEQLQSSHSQTLLRIQQLLNFPSALSNWNNSTDFCNTDSNSSLAVVCYEDTITQLHIIGEGKTQPLPKNFSIDSFVTTLVKLPSLKVLTLVSLGIWGPLPGKISRLSSLEIVNMSSNHLYSSIPMELSSLSNLQTLILDNNMFSGQLPIWIDLLSELTVLSLKSNLFNGSLPNSVSNLENLRILSLSHNKLYGLVPDLSHLRNLQILELDSNAFGPQFPKLGNKLVTIVLRDNKFRSGIPAELSSYYQLERFDISSNTFVGPFQPTLLSLPSIAYLNISRNKLTGMLFENVSCNSEIEVVDLSSNLLTGSLPKCLVSNSSDRTVLYARNCLETTNQNQHPPPFCHTEALAVGILPETKKKKQVSKVVLTLGIVGGTLGGVALAFLILFIFRRENARSKMKNPPTRIISENAASGYTSKLLSDARYISQTKKFGALGLPNYRSFSLEEIEAATNNFDTASLMGEDSYGEMYRGQLKNGSFVVIRCVKMNKRYSTQNFMQHMELISKLRHRHLVSAIGHCFECSLEDSSVSKIFLVFEYVPNGTLRSWTSDGHTGKSLNWTQRIGAAIGVAKGIQFLHTGIVPGVYSNNIKIEDILLDRNFVAKISSYNLPLLSNIGKVRRGNSSNGSKHSGINKSGKHEDKCDIYDFGVILLEIILGRTIKTTNDAEAFKDLLQASLGADEDARRSIVDPAIRKACLSQSLKTMMEICVKCLFKDPAERPSTEDVLWNLQFAAQVQDAWRGDSQSSEGSPGSPLEARRQAFH* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1199 801 SMART LRR_typ_2 146 170 IPR003591 -
Tpr6g1199 801 SMART LRR_typ_2 194 217 IPR003591 -
Tpr6g1199 801 SMART LRR_typ_2 218 241 IPR003591 -
Tpr6g1199 801 ProSiteProfiles Protein kinase domain profile. 495 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1199 801 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 26 789 - -
Tpr6g1199 801 Gene3D Phosphorylase Kinase; domain 1 466 577 - -
Tpr6g1199 801 Gene3D Transferase(Phosphotransferase) domain 1 578 785 - -
Tpr6g1199 801 Pfam Protein tyrosine and serine/threonine kinase 499 765 IPR001245 GO:0004672|GO:0006468
Tpr6g1199 801 Gene3D Ribonuclease Inhibitor 45 262 IPR032675 -
Tpr6g1199 801 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 26 789 - -
Tpr6g1199 801 ProSiteProfiles Leucine-rich repeat profile. 220 242 IPR001611 GO:0005515
Tpr6g1199 801 SUPERFAMILY Protein kinase-like (PK-like) 477 770 IPR011009 -
Tpr6g1199 801 Gene3D Ribonuclease Inhibitor 263 379 IPR032675 -
Tpr6g1199 801 SUPERFAMILY L domain-like 52 371 - -
Tpr6g1199 801 MobiDBLite consensus disorder prediction 779 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1199 Tpr-Chr6 12148064 12153015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1199 61 789 Miscellaneous Gene Families AT3G03770 62.807 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Tpr6g1199 PK_Tyr_Ser-Thr 2.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1199 - - gmx:100807539 1245.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1199 6 12148064 12153015 Tpr6g1199 6 12148064 12153015 ECH