Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1169 ATGGTTAACATCCACCATTCTTACACAGTAACACCTTCCAAGAAAACACCAACCACAACACTCTCTCTTTCCCTTTGTGATCAACTTAAGCTCCCTAATCATGGATACCAACTTTATCTCTACACAAACAACAAAAACCATTCACCATCACTCATCTCTTCAACAAACATTCTCATAACCTCTCTCTCCAAAACACTCACTCACTACTATCCCTTTGCAGGTAGATTAACATGGATCAAACCAAAAAACCACTTACAACTTCATTGCAACAACAAAGGTGCATACTTCTTAGAAGCAACTTGTGATGATACTTTAAAAGATTTATTAGGTAGTAGTTTTGATTCTACCCATGATGTTCAAAAACTACTCCCAAAAATTAACTATGATGTTCCTATTGAACATGTTCCTTTGTTGGTTATTCAATTCACCAAATTCTCTTGTGGTTCTTTCTCTCTTGCTATTGCTATGTGTCGTCCTGTTCTTGATGGTTCCTCTGCTTCTAATTTCATCAATTCATGGGCTAAGCTAGCTAAAGGTGAGAATTTAGATTCTTATTTGATTCCTTTTCTTGATAGAACTTTGTTAGATTCAAAAATCCTTAATTTACCTTCACGTTTTCAACACCATGAATTTTCTCCACCACCCCTTTGGGAAAATTGTAGTAATAACTCAACCCATTTGAGAAAAAATCCATCTTTTGCCATTGCCATGTTGAAATTCACCAAAAACCAAGTTGAAAAACTCAAGAACAAAGCCAACAACAATGAAAACAAGGTACGAGGTTATACTAGTTTTGAGGTTATTACTGGTTACTTATGGAGATGTGTTAGTAAAGTACGTTTTGAAGGTAATTGGAATCAACCAACAAGGTTAACAACTTTGGTTAATTGTAGAAAAAAGTTGAATCCATCTCTTCCTATGAATTATTTTGGGAATGCAACTTTTCCAACAGTGACACAAATTTGTTCATTTGATGATGTTGTGAATAAGCCCTTTTGTTATGTGGTTGGGAAAGTGAGAGAAGCTATTGAGAAAATGAATGATGAGTATGTAAGATCTGTTCTTGATTATATAGCAAATCAGAAAGATATGAATTTGTTAAGAGACAGGTTTTATAACTTTGCTCAAAGAAATGGACAATTTGGCGATAACCCGAATTTGTATGTTGTTGGTTGGACTAATTTTCCATTTTATGAGACTGATTTTGGGTGGGGGAAACCTGATTATTTGGTTCCTGGGATTGATAATTCTAATGGTATTGGTAAGGTTTTTGTTGTTGATGATGCTAATGGTGATGGTTTTTATGTAACTGTTTGTTTGCAACCTTTTCATATAGATTCTTTGAAGAAGTTGTTTTATGAGGATATGGAGATTATCACTAGTTCCAAACTTTGA 1395 0.3434 MVNIHHSYTVTPSKKTPTTTLSLSLCDQLKLPNHGYQLYLYTNNKNHSPSLISSTNILITSLSKTLTHYYPFAGRLTWIKPKNHLQLHCNNKGAYFLEATCDDTLKDLLGSSFDSTHDVQKLLPKINYDVPIEHVPLLVIQFTKFSCGSFSLAIAMCRPVLDGSSASNFINSWAKLAKGENLDSYLIPFLDRTLLDSKILNLPSRFQHHEFSPPPLWENCSNNSTHLRKNPSFAIAMLKFTKNQVEKLKNKANNNENKVRGYTSFEVITGYLWRCVSKVRFEGNWNQPTRLTTLVNCRKKLNPSLPMNYFGNATFPTVTQICSFDDVVNKPFCYVVGKVREAIEKMNDEYVRSVLDYIANQKDMNLLRDRFYNFAQRNGQFGDNPNLYVVGWTNFPFYETDFGWGKPDYLVPGIDNSNGIGKVFVVDDANGDGFYVTVCLQPFHIDSLKKLFYEDMEIITSSKL* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1169 464 Coils Coil 238 258 - -
Tpr6g1169 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 50 460 - -
Tpr6g1169 464 Gene3D - 1 213 IPR023213 -
Tpr6g1169 464 Gene3D - 223 455 IPR023213 -
Tpr6g1169 464 Pfam Transferase family 1 453 - -
Tpr6g1169 464 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 50 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1169 Tpr-Chr6 11796618 11798378 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1169 2 454 Monolignol Biosynthesis Gene Families AT5G48930 32.819 2.12e-75 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1169 K13065 - gmx:100819383 494.967