Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1168 ATGAGTTCCTCAAACGTTACATATTCAATTTTCACAAACCGTGACAAAACATCAACGCAGGTGTGTTATAATAAGACAACAACACACGGTTCCACGCTTTGGCGTCAAAATTCTTTAGAACAAACACTACCTTCATTTGTTCTTCAATTAGCTCTTATCTTATCACTCAATCGTATTTTCCTCTTTCTCTCTGAATTTTGCAATGTACCTCGTATTGTTCCCAACATTTTTACTGGTTTTTTATTAGGTCCATCTGTTTTGGGAAAATGGAAATATTTCTACCAAAGTGTATTCCCATTCAACAGTTTGTTACCATTAGAGACAGTGGGAGCATTGACACTTGTTTACTATGTGTTCTTGGTTGGCTTAGAAGTGGATTTGAAAGGAATTAAAAGATGTTACTTCAATAAGAAGGCAATGATTGTTACATTTACTGGTATATTCTTCACATTACCAATTGGTATGTTGTTATATTACCTTCTTGTAACTGACATGGGTCACAAAAAATTGTCACCTCTGGAGACTGATAAACACATGAGTGGTGCATTAATTTGGGGAATGACTCTTTCATGTAGCAGTGAGTTTACTGAAATTGTTAAAATCCTTTCAGATTTGAAGCTTTTGTTAACAGATAATGGACAATTAGCAATAACTTCTATTTTGATTAATGACTTGTTCTCTTGGACATTATTTATGTTGGGTCTAACACAACTCATTTATGCTTCTTTTGTGTCGATACTCATCATCGTCGTACTTGTGTTGGTATATGTTTATGTGATTCATCCTTTTGCTAAGTGGCTTGTTAAGAAATTTTCAAAAGCTGATCGCGAGTTTAGGGTGACGCAAGTGGTGTTTCTTCTTCATGTGGTTTTGGTCATTGGATTAATCACTGATGGGTTAGGTTCACATTCGATAACCGGTGCTTTCTTTTTAGGAGTTGTTATTCCAAAGGGTGCGCTTAATAATGCGGTTCAAGATAAGGTTTATGATTTTGTGTCTGCATTCATGATGCCTCTATTTTTTCTCATGGTTGGGGAGAGAACTAATATTCAAGATTTGGCTTTGAACACACGTTGGTTAACCGTTGTGATTGTTATTATGTTGGCTTTATTGGTAAAAATGGTGTTCGTATTTGCGGTTTCTAGGATGTATCGGATGCCACTCATGGAAGGATTATCCCTTGCACTTCTCATGAATACTAAAGGGACAATGCCGTTAATCATTCTGTACTCTGCCATAGATAGACTAGAACTAGGGAGCCAAGCCTTTGTGGTGATGTTGTTGGCGTGTTGGTTAATGACAGCTATTGCTGGTCCTGTCTTATATATCATCACAAAAACCACAAGCAAACATATTGGAAGTAAAAGGAAGCATATCCAAGACACGCGACCAGACTCACCACTTAGAGTGTTGGCTTGTGTCCACTCAAAACACGACGCCAATGCCATCATCGACCTTCTCAAAGCATCCAGTCCATCAGTTAGGTCTCCAATTCAGGTGTTGGCAGTGGAGTTGATCGAGATGACAGATAGACCAAATTCATCACTGGTCATAAGAGACGCTCGGAAGCCATCATTTAGAGCCCATTCATGCCGGGTGGATAGTGTACAGAAAAACAACGGAGACAAACTTGGAAGCTTTGACAACCTCAGCCAAGCTATATTTGCTGACAAACTCAGAATTATCTCTGATTACAACACCATGCACAAAGACATCATAAACCTTTGCGCACGCAGAAACGTAAACCTCATTGTAACCACTCTCCACAGACAACCTACCTATGACGGATTAGGCGCAGGCACCGCGACTGCTAGAGCCGTCAACATAATCAACAGAGACCACGCAAGCAAGGATGAGAAGAGACTAGTGGTTGAGAATCTAGAAAAAGAAGCACCATGCTGTTTAGCAATTTTCGTTGACCGTGAGTTCGGTGGTGAGAATCGTTCTAAACAGATGAGAATAGCTATGCTCTACCTTGGTGGTGCTGATGACCGCGAAGCACTTTCTTATGCTTGGAGAATGAGTAGAAACATGGAGGTTAAGTTAACAGTGGTGAGGCTTGTTTGGGACAGTCCTGATGATGAGTTTGATGAATTGGACAGAGAGTATTTGAGAGCTTTTGTGTATCAAACAAACGATACACCAACGGTGAGGTATTTGGAAAAAGTGGTGAAAGATGAGAAGGAAACTGTGAGGCTTTTAAATAGGATAGGGAATAAAGGATTCGATTTGTATATCATCGGGAGAGGACATGGGAGGAAAATGCCGTTGGCGCAAACGTTGGATCCTGTTTTGGATGAGCCTGTTTTTGGTCCTCTTGGTGATACTTTGACAGATTTGAATTCTGCTGCTAAGACATCTATTTTGATATTTCAAAAACAAGCTGAAAGTAATGATTCGAAGAAACATGAGTACAATGCTTCTGCGACGTCTTTGCAGTTTCTTGATAGTGTTATGGATCAACAGCAACAGGTGTATACTCCAGCAGTGTCATTTGGTCCCAATTTTCGGTGA 2514 0.3974 MSSSNVTYSIFTNRDKTSTQVCYNKTTTHGSTLWRQNSLEQTLPSFVLQLALILSLNRIFLFLSEFCNVPRIVPNIFTGFLLGPSVLGKWKYFYQSVFPFNSLLPLETVGALTLVYYVFLVGLEVDLKGIKRCYFNKKAMIVTFTGIFFTLPIGMLLYYLLVTDMGHKKLSPLETDKHMSGALIWGMTLSCSSEFTEIVKILSDLKLLLTDNGQLAITSILINDLFSWTLFMLGLTQLIYASFVSILIIVVLVLVYVYVIHPFAKWLVKKFSKADREFRVTQVVFLLHVVLVIGLITDGLGSHSITGAFFLGVVIPKGALNNAVQDKVYDFVSAFMMPLFFLMVGERTNIQDLALNTRWLTVVIVIMLALLVKMVFVFAVSRMYRMPLMEGLSLALLMNTKGTMPLIILYSAIDRLELGSQAFVVMLLACWLMTAIAGPVLYIITKTTSKHIGSKRKHIQDTRPDSPLRVLACVHSKHDANAIIDLLKASSPSVRSPIQVLAVELIEMTDRPNSSLVIRDARKPSFRAHSCRVDSVQKNNGDKLGSFDNLSQAIFADKLRIISDYNTMHKDIINLCARRNVNLIVTTLHRQPTYDGLGAGTATARAVNIINRDHASKDEKRLVVENLEKEAPCCLAIFVDREFGGENRSKQMRIAMLYLGGADDREALSYAWRMSRNMEVKLTVVRLVWDSPDDEFDELDREYLRAFVYQTNDTPTVRYLEKVVKDEKETVRLLNRIGNKGFDLYIIGRGHGRKMPLAQTLDPVLDEPVFGPLGDTLTDLNSAAKTSILIFQKQAESNDSKKHEYNASATSLQFLDSVMDQQQQVYTPAVSFGPNFR* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1168 837 Pfam Sodium/hydrogen exchanger family 57 444 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr6g1168 837 PANTHER CATION/H+ EXCHANGER 3 17 802 - -
Tpr6g1168 837 Gene3D - 44 454 IPR038770 -
Tpr6g1168 837 PANTHER CATION/H + ANTIPORTER 17 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1168 Tpr-Chr6 11788852 11793057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1168 21 797 Antiporter Super Family AT2G13620 32.964 8.50e-137 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1168 - - aprc:113862236 1025.39