Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1161 ATGGATGCATCTTGGTTGATAATCATATTACTACTTCTACTTGTTCTTCTATGTCTTTCAATGCTTATTATCATCACAAGAATAAGATCCTCCATTAACCTCCCTCCCGGACCTTTATACATTCCTTTCATTACTGACATCCTCTTGCTACCAAAAATATCATTCTCACAACTCAAACCAATTCTTCATGATCTTCATGCCAAACATGGCCCTATCATTTCGGTCCACTTTTGGTCTACTCATATTTTCATATTCGATCGTTTCCTCGCACACAAAGCCTTAATCCAAAATGCTTCTGTTTTTGCCAACCGCCCAAAATCCATAAACAATAACATCCAACTTAATATCACATCGTCTTTCTACGGCTCCACGTGGCGCATTCTTCGCAATAACCTAGCATCTACCATGCTTCACCCATCACGATTCCAATCATTTTCCAAAACTCGCACGCGTGTATTGGAAGCGCTTTTAAAAGAATTAAAGTTAGAAGCTAAAGTTATGAACAATTCTGTTAAGCTCATCAACTACATTCACCACGCCATTTTTTGCTTACTAGCTTTCATGTGTTTCGGTGAAAATGTTGACAATAAAAAAATTGAAAACATAAAAAACATTCAAAAATGTTTGATTATGAGCTCCGGAAAATACAGTGCCTTAAATTTCTACCCAAAATTTGTATCTCGCATGTTATTCCGAAAGCGTTGGCAAGAATTGTCACAACTTCGGAAATTCCAAAATGATTTGATGGTTGAACTAATACAGTCCCGAAAGAAAGTTATTGAAAATAATAATTATGATGATGATGGATGTTTTGTTTGTTATGTGGATACTTTGTTGAACTTGAAATTGCCCGAGGAAAAACGAAAGCTTGATGAAGGTGAACTTGTTGCTCTTTGTTCGGAGTTTCTCACCGCGGGAACAGATACAACTTCAACTACAATTGAGTGGGTTATGGCAAATTTGGTGAAACACAAACACATGCAACAGAGGCTAGTAGAGGAAATTGAAGATGTAGTTGGCGATAGAGAGGAAAAGAAAGTAAGAGAGGAAGACTTAGAAAAATTACCATATTTGAAGGCTTTGATTTTGGAAGGGTTAAGGCGTCATCCTCCTTCTCACTATGCAATTCCACATGCAGTGACCGAGGATGTTATTTTGAATGGTTATTTTGTACCTAAAAATGGGACTGTGAATTTTATGGTGGCAGATATAGGATTGGATCCAACGGTTTGGAAGGATCCTATGGTGTTTAAGCCAGAACGATTTTTAAGAGATGAAACAAGTAGTAGTAATATTTTAGAAGCATATGATATTAGTGGTAAAAAAGAGATAAAGATGATGCCATTTGGAGCTGGGAGGAGGATTTGCCCGGCATATAAATTAGCAATGCTCCATTTAGAATATTTTGTTGCTAATTTGGTTTTGAACTTTGAGTGGAAGACTTTACTATCCACAGAAAATGTTGATTTGTCTGAAAAACAAGAATTCACTATGGTGATGAAACATCCACTACAAGCTCAAATTTCTCAAAGGAGTAAAACAGTCACATGA 1551 0.3656 MDASWLIIILLLLLVLLCLSMLIIITRIRSSINLPPGPLYIPFITDILLLPKISFSQLKPILHDLHAKHGPIISVHFWSTHIFIFDRFLAHKALIQNASVFANRPKSINNNIQLNITSSFYGSTWRILRNNLASTMLHPSRFQSFSKTRTRVLEALLKELKLEAKVMNNSVKLINYIHHAIFCLLAFMCFGENVDNKKIENIKNIQKCLIMSSGKYSALNFYPKFVSRMLFRKRWQELSQLRKFQNDLMVELIQSRKKVIENNNYDDDGCFVCYVDTLLNLKLPEEKRKLDEGELVALCSEFLTAGTDTTSTTIEWVMANLVKHKHMQQRLVEEIEDVVGDREEKKVREEDLEKLPYLKALILEGLRRHPPSHYAIPHAVTEDVILNGYFVPKNGTVNFMVADIGLDPTVWKDPMVFKPERFLRDETSSSNILEAYDISGKKEIKMMPFGAGRRICPAYKLAMLHLEYFVANLVLNFEWKTLLSTENVDLSEKQEFTMVMKHPLQAQISQRSKTVT* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1161 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Tpr6g1161 516 Gene3D Cytochrome P450 28 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1161 516 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1161 516 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1161 516 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1161 516 SUPERFAMILY Cytochrome P450 35 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1161 516 Pfam Cytochrome P450 35 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1161 516 PANTHER CYTOCHROME P450 10 510 - -
Tpr6g1161 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 510 - -
Tpr6g1161 516 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1161 516 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1161 516 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1161 516 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1161 516 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1161 516 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1161 516 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1161 516 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1161 Tpr-Chr6 11719442 11721340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1161 5 512 Cytochrome P450 AT1G64940 47.801 6.99e-171 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1161 K24184 - gmx:100795683 548.125