Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1150 ATGGCTGAATCATTTGTATTTCATATTTCTAGTTCACTTCTAACAAAGCTTGGTTCATATGCGTATGAAGAAGCTTCTCGAGCCTATGGTGTGTATAAAGATCTCGAGAGGATCAAAGACACTTTGTCAATTGTCAGAGGTCTGTTGTTAGATGCTGAAGAGAAGAAGAACCAACAACATGCCCTGCATGAATGGCTGAGGCAGATTCATAACATATGCTCTGATGCTGAAGATGTATTCGATGGATTTGAGTTGCAAGACAAGCGAAAGCAGGTTGTGAAAGCTTCTGGCAGCACATGGATGAAGGTATGCCACTTCTTTTCTTCCTCTAATCAACTTGCTTTCAATATTAAAATGGCACATCAAATCAAAGAGATTAGGGGTAGGTTGGATAAAGTGGCAGCTGATGGAACCGGGTTTGGACTTGTGAGAATCAATGTTGAACCCGGACTTCATATGCAAAGAAGAGAGTACACTTATTCCCATGTTGAAGCTTCAAAAGTAATTGGGAGGGAGAATGACAAGGAAGCAATTATCAAGCTTTTAATGGAATCCAATCTTCAGGGTGATGGTGGTAAAAGTCTTTGCGTTATTCCCATAGTGGGAATTGGAGGATTGGGGAAGACCACACTTGCAAAGTTGGTATTCAATGATAAGAGGATAGATGAAGTTTTTCAATTGAAGGTTTGGGTGTGTGTCTCCAATGATTTTGATATTAGGCACATAATTATCAAAATTATCAACTCAACTGTTGCTCATCAAGAAAACATAAACCACTTTGATATTGAGCAGCTACAAATTCGTTTAAGACATAAACTTTCTGGTCAAAAGTTTATCCTTGTGCTAGATGATATATGGAATGATGATCGTGCAAAATGGATTGAATTGTCAGATTTGATCAATGTTGGTGCGGTAGAAAGTAAAATCATAGTGACGACACGTAGCAACTCAATTGCTTCAATGATGGGCATTGTTCCTTCATATGTTTTGGAAGGTCTTTCGCCGGAGAATTGTTTGTCTTTGTTTGTGAAATGGGCATTCAAGAATGGAGAAGAAGAAAAATATTCAAATCTAGTTGAGATCGGAAAAGAAATTGTGAGAAAATGTGCAGGAGTTCCGTTAGCCGTCAAAACATTAGGAAGTTCCCTGTTCTCAAAATATGATCTAAATAAGTGGATATTCATAAGAAACCATGAGATATGGAAGTTAGAACAGAAGAAAGATGATATTTTACCTGCATTAAAATTAAGTTATGATGAAATGCCATCCTATTTGAAGCAATGTTTTGCTTACTTTTCCTTGTATCCCAAAGACAGTGTCTTTTCTATCTCTGAAATTGCTGATATTTGGATAGCCCTTGGATTAGTTCAATCCATGAATGAAAGTGAAAATCTACAGAATATTGCAAGAGACTATATAAATGAGTTACTTTCAAGATCATTGCTTCAGGATTTCTTTATCACCGGGAACCGCGGCAGTTTCAAAGTGCATGATTTGATCCATGATCTGGCATTGTATGTTGCAAAAGAGGAATTTGTAATAGTATGCTCACATACTCGAAATGTATCTGAACAGGCAAGGCATTTATCAATCGTTGAAAATGATTCACTTGGCCATGTTTTATTCCCCAAGTCCAAAATTGTAAGGACTATTCTATTTCCCATTGAAGGAGTGGGCCTTGACAATGAAACATTGTTGAATACATGGCTATCAAGATATAAATACTTGCGATATTTAAATTTAAGTTATTCTTCATTTGAGATTCTGCCTAATTCAATTTCTAAATTGGAGCACCTGCGTGTTCTCATTCTCTACAATAATAGCAAAATCAAAAGACTTCCTCATTCTATTTTCAAACTCCATAATTTGCAAGTCTTGCTGCTAAATGGATGCACAGAGCTTGAAACATTGCCAAGAGGATTAGGGAAGATGATCAGCCTTCAACATTTGTATATAACCACCAAACAATCAGTTCTGTCATTGGCTGAATTTGTTAACTTGAACCATCTTCAGACTTTGGCTTTTCAATTTTGTAAAAATTTGAAGTTTATATACAATGCGGAACAACAACTCACTTCCATTAGAACATTGTCTTTGCAATCATGTGGGAGCTTGGAATCCTTACCTCTTCATCTTTTTCCCAATTTAGAGTCTCTATTAATTATAGACTGCAACATGTTAAATATGTCGTTGAACAACGAAAACCCAATCCAAACATTGATGTTGAAACATTTGCTTATTAGGGATTTTCCAGGGCTTTTGACATTGCCTGAATGGATTGAAGGGGCTCTAGAAACTTTAGAGACCTTGCTAATTTATGAACTTCCTAATCTTCATACGCTTAAGTGTCTTACAACAATGATCCATCTTAAAAGGCTTGATATTATTCGTTGTCCTCAACTATTGAGCCTTCCAAGTGACATACATTGCCTCACTGCGCTTGAGCATTTGGTCATAGATGAATGTCCTGTGTTGTGCCGAAAATGTAAGCCGCAATATGGTGAGTATTGGCCAATGATTGCGCACATCAGAATTGTTTTCATTGGAGAACCAATTGGACAAGAGGAGGAATGA 2574 0.3691 MAESFVFHISSSLLTKLGSYAYEEASRAYGVYKDLERIKDTLSIVRGLLLDAEEKKNQQHALHEWLRQIHNICSDAEDVFDGFELQDKRKQVVKASGSTWMKVCHFFSSSNQLAFNIKMAHQIKEIRGRLDKVAADGTGFGLVRINVEPGLHMQRREYTYSHVEASKVIGRENDKEAIIKLLMESNLQGDGGKSLCVIPIVGIGGLGKTTLAKLVFNDKRIDEVFQLKVWVCVSNDFDIRHIIIKIINSTVAHQENINHFDIEQLQIRLRHKLSGQKFILVLDDIWNDDRAKWIELSDLINVGAVESKIIVTTRSNSIASMMGIVPSYVLEGLSPENCLSLFVKWAFKNGEEEKYSNLVEIGKEIVRKCAGVPLAVKTLGSSLFSKYDLNKWIFIRNHEIWKLEQKKDDILPALKLSYDEMPSYLKQCFAYFSLYPKDSVFSISEIADIWIALGLVQSMNESENLQNIARDYINELLSRSLLQDFFITGNRGSFKVHDLIHDLALYVAKEEFVIVCSHTRNVSEQARHLSIVENDSLGHVLFPKSKIVRTILFPIEGVGLDNETLLNTWLSRYKYLRYLNLSYSSFEILPNSISKLEHLRVLILYNNSKIKRLPHSIFKLHNLQVLLLNGCTELETLPRGLGKMISLQHLYITTKQSVLSLAEFVNLNHLQTLAFQFCKNLKFIYNAEQQLTSIRTLSLQSCGSLESLPLHLFPNLESLLIIDCNMLNMSLNNENPIQTLMLKHLLIRDFPGLLTLPEWIEGALETLETLLIYELPNLHTLKCLTTMIHLKRLDIIRCPQLLSLPSDIHCLTALEHLVIDECPVLCRKCKPQYGEYWPMIAHIRIVFIGEPIGQEEE* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1150 857 Gene3D - 153 325 IPR027417 -
Tpr6g1150 857 Gene3D Ribonuclease Inhibitor 552 831 IPR032675 -
Tpr6g1150 857 Pfam NB-ARC domain 172 419 IPR002182 GO:0043531
Tpr6g1150 857 Gene3D - 332 416 IPR042197 -
Tpr6g1150 857 CDD RX-CC_like 2 134 IPR038005 -
Tpr6g1150 857 Pfam Rx N-terminal domain 11 98 IPR041118 -
Tpr6g1150 857 PANTHER DISEASE RESISTANCE PROTEIN RP 6 743 IPR044974 GO:0006952
Tpr6g1150 857 Gene3D - 10 124 - -
Tpr6g1150 857 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 743 - -
Tpr6g1150 857 SUPERFAMILY L domain-like 495 843 - -
Tpr6g1150 857 PRINTS Disease resistance protein signature 197 212 - -
Tpr6g1150 857 PRINTS Disease resistance protein signature 272 286 - -
Tpr6g1150 857 PRINTS Disease resistance protein signature 369 383 - -
Tpr6g1150 857 PRINTS Disease resistance protein signature 689 705 - -
Tpr6g1150 857 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 431 IPR027417 -
Tpr6g1150 857 Gene3D - 417 506 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1150 Tpr-Chr6 11608619 11612510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1150 198 801 WRKY Transcription Factor Family AT5G45050 23.008 1.83e-15 79.3