Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1147 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCAAAGCGGCTTGGAGATCTTCAGCCTGATCCACTACCTGCTGATCAAGGAGAGAATTGGGCAGAGCCTGCGCAGAACAGAACTAGGAGGAGAGTTGGAGGTGGAAGAGGAAGAGGTGGTAATGCCACAGGTTTAGGTAAAGGGTCTTCACCAGCTGTACCTACAAGACGAACTGCAGCTGGTAGAGGCCGCGGAGCAAGATTGATTGATTTGGATCCTGAACCTCGTGAGGTACTGCCAGAACCTGTTGCATTAAGGGCTCAGGAACCTGTTTACAATCAAGTAGAGGTAGTGGCCAATAATAACATTTTGATGGAGGGTGGAAGTGGTGATAAAGCGGCAGCAGCTGAAGAGGAAGCAACCACAACCCCTGTCCCTGATAGGGTACAAGTTGGTAACTCTCCTGTATATAAGACAGAAAGGAAGCTGGGTAAGGGTGGTTTCGGCCAAGTGTATGTTGGCAGAAGGGTTAGTGGTGGCTCTGATCGAGTAGGTCCTGATGCCATTGAGGTTGCACTCAAGTTTGAGCATAGAAACAGTAAAGGTTGTAATTATGGGCCTCCTTATGAGTGGCAAGTTTACAGGTATAAACAATCTATCCTTCATGTATGTAAAGGCTTACCATGTGCTTTAATTTTATTATTATATCCAATTCTCACTTTTGTATTTTTGGCATTGATAAGTACTCTGAATGGTTGCTATGGCATTCCTGGGGTTCATTACAAGGGTCGACAAGGAGATTTCTACATTTTGGTGATGGACATACTCGGGCCCAGTCTTTGGGATGTATGGAATTCTCTTGGTCAATCGATGTCGCCAAGTATGGCTGCTTGCATTGCAGTGGAGGCAATATCAATTCTTGAGAAGCTCCATTTGAAAGGGTTTGTGCATGGAGATGTAAAACCAGAAAACTTTTTGCTTGGTCAACCTGGAACGGCTGATGATAAGAAGTTATATCTTATTGATCTTGGTTTAGCTTCTAAATGGAAGGATGCATCATCTGGTCAACACGTTGAATATGATCAGAGACCTGATATATTCAGGGGAACAATAAGGTATGCTAGTGTACATGCACATTTAGGTAGGACTGGCAGTCGAAGGGATGATCTCGAGTCACTGGCATACACATTGATATTTCTCATAAAAGGGAGATTGCCGTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAAATGTCCACTTCTGCGGAGTTGATGTGCTGCTTTTGTCCTGCTCCATTTAAGCTGTTCCTAGAAGCAGTTACTAACATGAGATTTGATGAGGAGCCAAATTATTCCAAGCTTATATCACTTTTTGACAGCTTGATCGAACCATGCACTCCATTGAGACCTATTAGAATTGATGGAGCTTTGAAGGTTGGTCAAAAGCGAGGAAGGATGCTTATAAATCTGGAAGAAGATGAACAGCCTAAGAAAAAAGTACGATTGGGGAGTCCTGCTACTCAGTGGATATCTGTTTATAATGCACGCCGTCCCATGAAGCAGAGATATCACTATAACGTAGCGGACAATAGGCTCCGGCAGCATGTAGACAAGGGTATTGAGGATGGGCTGTATATAAGCTGTGTGGCCTCTTCATCAAGTTTGTGGGCCCTAATCATGGATGCAGGAACAGGTTTTTCTTCCCAGGTTTATGAGTTATCACCGGCCTTCCTGCACAAGGATTGGATTATGGAGCAATGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAGTTAATGGCAGTTCCTTGGTTGTCATGTCCAAAGGAACTCCTTATACACAGCAGTCCTACAAAGTGAGCGAATCATTTCCTTTCAAATGGATAAACAAGAAATGGAAAGAAGGGTTCCATGTTACCTCCATGACTACTGCTGGCAGTCGTTGGGGTGTTGTTATGTCCAGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTTGACTTTTTGTATCCAAGTGAAGGAATCCATCGGCGATGGGAGAACAATTACCGGATTACTTCAATGGCTGCTACTAATGATCAGGCAGCCTTCATACTAAGCATACCGAAACGCAAATTAGTTGATGAAACCCAAGAGACTTTACGGACATCTGCTTTCCCTAGCACCCATGTAAAGGAGAAATGGTCGAAGAATCTCTACATTGCCTCGATTTGTTACGGACGAACTGTTTGCTAG 2226 0.4385 MPELRSGARRSKRLGDLQPDPLPADQGENWAEPAQNRTRRRVGGGRGRGGNATGLGKGSSPAVPTRRTAAGRGRGARLIDLDPEPREVLPEPVALRAQEPVYNQVEVVANNNILMEGGSGDKAAAAEEEATTTPVPDRVQVGNSPVYKTERKLGKGGFGQVYVGRRVSGGSDRVGPDAIEVALKFEHRNSKGCNYGPPYEWQVYRYKQSILHVCKGLPCALILLLYPILTFVFLALISTLNGCYGIPGVHYKGRQGDFYILVMDILGPSLWDVWNSLGQSMSPSMAACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGTADDKKLYLIDLGLASKWKDASSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSAELMCCFCPAPFKLFLEAVTNMRFDEEPNYSKLISLFDSLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADNRLRQHVDKGIEDGLYISCVASSSSLWALIMDAGTGFSSQVYELSPAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWENNYRITSMAATNDQAAFILSIPKRKLVDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1147 741 Pfam Protein kinase domain 256 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1147 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Tpr6g1147 741 MobiDBLite consensus disorder prediction 1 16 - -
Tpr6g1147 741 SUPERFAMILY Protein kinase-like (PK-like) 147 467 IPR011009 -
Tpr6g1147 741 PANTHER CASEIN KINASE-RELATED 103 218 - -
Tpr6g1147 741 PANTHER CASEIN KINASE-RELATED 238 715 - -
Tpr6g1147 741 Gene3D Transferase(Phosphotransferase) domain 1 115 497 - -
Tpr6g1147 741 MobiDBLite consensus disorder prediction 1 77 - -
Tpr6g1147 741 PANTHER BNAA05G37270D PROTEIN 103 218 - -
Tpr6g1147 741 PANTHER BNAA05G37270D PROTEIN 238 715 - -
Tpr6g1147 741 SMART serkin_6 147 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1147 741 CDD STKc_CK1 147 454 - -
Tpr6g1147 741 ProSitePatterns Protein kinases ATP-binding region signature. 153 184 IPR017441 GO:0005524
Tpr6g1147 741 ProSiteProfiles Protein kinase domain profile. 147 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1147 Tpr-Chr6 11578893 11586666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1147 285 454 MAP Kinase Kinase Kinase AT3G27560 22.674 5.80e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Tpr6g1147 Pkinase 7.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1147 - - gmx:100801967 1291.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1147 6 11578893 11586666 Tpr6g1147 6 11578893 11586666 ECH