Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1128 ATGGAAACCCCACAAACCAATTTGCCCCCCGGTTTTAGGTTCCACCCTACTGATGCAGAACTCATTCTTCACTACCTTAGAAAAAAAATTGCCTCCATTCCCTTGCCTGTTTCCATTATTGCTGAAGTTGATATTTATAAGTTAGACCCTTGGGATTTACCAGCTAAGGCTTTGTTTGGTGAGAAAGAATGGTACTTTTTTAGTCCTAGAGATAGAAAGTATCCAAATGGTGCAAGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAGGCAACAGGCACTGATAAGACCATAGTTGCATCATTGCCAATTGGAGGAGGAAGAGCAAAAGAGAACATTATTGGTGTTAAAAAGGCTCTTGTATTTTACAAAGGGAAACCCCCAAAGGGTATTAAGACGAATTGGATCATGCATGAATATCGCCTTGTTGATAATAATAAACCTATTAAGCTCAAAGATTCTTCCATGAGGTTGGATGATTGGGTACTATGCCGAATTTACAAGAAATCAAAATGCGCGCTAACTTCATCAGAATCATCGTCAGAAACAATGGTGGGCGACGTGGAACATGCAGAAGATCCGGCGCAATTCAAGGAAACCCTTTTCCCAATCACAAAAAACAACACAACCTCTCCTCATCAAAACAACCTTATATCTCAAAAATCAGTGTCCTTTTCCAACCTACTAGATGCTATGGACTACTCCATGTTGAGTAGCTTCTTATCTGAAAATCATTCAAACCCTTCAGGAATTGGATCAAGTTCAAGCTTCAACACTGAAAATTTTAATCAACAACAATCCTCCCAAATCAACACTAGCAACAATTACATGTCTCAAAATAAGAATCCTCAATTGAACACTTTAAAGCACCAACTTTCAAACATAGATGAAGACAACACTTCATTATACCCATCAAAGAAATACTTGAGTTCCTCTTGCAATTTCCCTAACATCAATTCACAATATGAAAACTACCTCATGAAGCAATCTTTGATGAATCAACAATTAATTCTTGGTCCTCATCACCAATATCAAGGCTAA 1041 0.3852 METPQTNLPPGFRFHPTDAELILHYLRKKIASIPLPVSIIAEVDIYKLDPWDLPAKALFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVASLPIGGGRAKENIIGVKKALVFYKGKPPKGIKTNWIMHEYRLVDNNKPIKLKDSSMRLDDWVLCRIYKKSKCALTSSESSSETMVGDVEHAEDPAQFKETLFPITKNNTTSPHQNNLISQKSVSFSNLLDAMDYSMLSSFLSENHSNPSGIGSSSSFNTENFNQQQSSQINTSNNYMSQNKNPQLNTLKHQLSNIDEDNTSLYPSKKYLSSSCNFPNINSQYENYLMKQSLMNQQLILGPHHQYQG* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1128 346 Pfam No apical meristem (NAM) protein 9 142 IPR003441 GO:0003677|GO:0006355
Tpr6g1128 346 ProSiteProfiles NAC domain profile. 8 169 IPR003441 GO:0003677|GO:0006355
Tpr6g1128 346 PANTHER NAC TRANSCRIPTION FACTOR 56 5 302 - -
Tpr6g1128 346 Gene3D NAC domain 17 173 IPR036093 GO:0003677|GO:0006355
Tpr6g1128 346 SUPERFAMILY NAC domain 4 169 IPR036093 GO:0003677|GO:0006355
Tpr6g1128 346 PANTHER OS01G0104200 PROTEIN 5 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1128 Tpr-Chr6 11331067 11333077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1128 4 346 NAC Transcription Factor Family AT3G04070 52.381 3.36e-108 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr6g1128 NAM 4.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1128 - - gmx:100301906 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1128 6 11331067 11333077 Tpr6g1128 6 11331067 11333077 ECH